Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2587 ATGAAGCTCTCAATTTCACTCACCATCCTCCTCCTACTATTCTCAAGCACCCTACTAGTCCAATCTCAACAACATAGTTCAACACTCCAAGTGTTCCATGTGAAACCACCAAAGCCACTCTCATGGCAAGACACTGTGCTCCAAATGCAAACCAAAGATGAAGGCAGACTTCAATACCTAACTAGTCTTGTGGCAGGCAGGTCTGTTGTCCCAATTGCCTCAGGCAGGCAGATCATTCAGAGCCCTACTTACATTGTTAGGGCTAAAATTGGAAATCCACCTCAGACATTGCTTTTGGCTATGGATACTAGCAATGATGTTGCTTGGATTCCTTGCACTTCTTGTGATGGATGTTCTTCCACTTTGTTTGCTCCTCTTGGATCTACCACATTCAGAAATGTTACTTGTGGCTCTCCTCAGTGCTATCAGGTACCCAATCCCAGTTGCAGTGGAAGCGCGTGCTCTTTCAACTTAACGTATGGAAGTTCATCTATTGCAGCTAACTTAGCCCAGGACACAATTACCCTTGCCACTGACCCAATTCCAAGCTACACTTTCGGTTGTGTTTCCAAGACTACTGGGCCTTCCACCCCACCACAGGGATTATTGGGCCTCGGCCGTGGCCCATTATCACTTTTGTCACAAACCCAAAACCTTTACCAGTCTACATTCTCTTACTGTTTGCCAAGCTTTAAGTCCCTTAACTTTTCTGGCTCATTGAGACTTGGGCCTGTTGCTCAGCCCATTAGGATCAAGTTCACTCCTCTTCTCAAAAATCCAAGAAGATCATCACTCTACTATGTTAATTTGGTTGCTATTAGGGTTGGCCGGAGAGTTGTTAATATTCCTCCGGCGGCTTTGGCGTTCAACCCGACCACCGGAGCCGGCACCATCTTTGATTCTGGTACGGTATTCACCCGGCTAGTTTCGCCCGCCTACGTGGCCGTGCGAGATGAATTCCGGAGAAGAGTTGGAGCGAACCTGACCGTGACAAGTTTAGGAGGATTCGACACATGTTACACGGTCCCAATAGTTGCACCCACAATAACGTTCATGTTTTCGGGCATGAACGTGACATTGCCACAGGACAACATTCTCATACATAGCACCGCCGGAAGCACGACATGCTTGGCCATGGCGGCCGCGCCGGATAACGTGAACTCGGTGCTCAATGTGATAGCCAACATGCAACAACAAAACCACCGTGTGCTCTTTGACATCCCCAACTCAAGGCTTGGTGTTGCTCGTGAGCTTTGCACCAAATAG 1266 0.4803 MKLSISLTILLLLFSSTLLVQSQQHSSTLQVFHVKPPKPLSWQDTVLQMQTKDEGRLQYLTSLVAGRSVVPIASGRQIIQSPTYIVRAKIGNPPQTLLLAMDTSNDVAWIPCTSCDGCSSTLFAPLGSTTFRNVTCGSPQCYQVPNPSCSGSACSFNLTYGSSSIAANLAQDTITLATDPIPSYTFGCVSKTTGPSTPPQGLLGLGRGPLSLLSQTQNLYQSTFSYCLPSFKSLNFSGSLRLGPVAQPIRIKFTPLLKNPRRSSLYYVNLVAIRVGRRVVNIPPAALAFNPTTGAGTIFDSGTVFTRLVSPAYVAVRDEFRRRVGANLTVTSLGGFDTCYTVPIVAPTITFMFSGMNVTLPQDNILIHSTAGSTTCLAMAAAPDNVNSVLNVIANMQQQNHRVLFDIPNSRLGVARELCTK* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2587 421 Gene3D Acid Proteases 246 421 IPR021109 -
Ahy10g2587 421 Gene3D Acid Proteases 43 243 IPR021109 -
Ahy10g2587 421 Pfam Xylanase inhibitor C-terminal 266 413 IPR032799 -
Ahy10g2587 421 PANTHER ASPARTYL PROTEASE AED3-LIKE 8 420 - -
Ahy10g2587 421 PANTHER ASPARTYL PROTEASES 8 420 IPR001461 GO:0004190|GO:0006508
Ahy10g2587 421 SUPERFAMILY Acid proteases 82 419 IPR021109 -
Ahy10g2587 421 ProSiteProfiles Peptidase family A1 domain profile. 84 415 IPR033121 -
Ahy10g2587 421 Pfam Xylanase inhibitor N-terminal 84 243 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2587 Ahy-Chr10 115347644 115352845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2587 84 421 Miscellaneous Gene Families AT1G44130 27.154 3.66e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2587 - - adu:107471868 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3148 20 142154465 142159404 Ahy10g2587 10 115347644 115352845 hybridization