Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2586 ATGGATCTCAAACATCAAACTATTAACACCCACCTTTCTAACCTCTCCTCCCACTCCCACACCACTCGCCTCGCCGCCCTCCGCCATCTCCGCCTTCTCTCCAACCAAGACCCCGCCGCCCGTCCCATCATCTCCGCTGCCGGCGCCATCCCCCACCTCCTTGACGCCCTCTTCTCCTCCTCCCACTCCATCCAGGACAACGCCGCCGCCACCCTCCTCAACATCTCAATCTCCGACCGCCTCCCACTTCTCTCCACGCACCATCTCCTCGACGCCATCGCCCACCTCCTGTCCAGCCACGCCACCTCATCCTCCCCCAACGCCGTCCAGTCCGCCGCCGCCACACTCCACTGCCTCCTCTCCTTCGTCCCTGAATTCCGTCCCACGGTAGGTGCCAGGCGCGACATCCTCCACTATCTCATTGGCATAATCGAATCTTCCGATTCGCCAAGGAGATCAGTGAAGGACGCGCTCAAGGCATCATTTGGAATAGCGCTGCATCCGCCGAACCGGGCCATAATGGTCCAGCTCGGCGCGGTATCAGCACTATTCCATCTGGTGACAAAAGAGAGAATTAAAAAAATTGGAATAATGGAAGATGCGACTGCAGTTATAGCGCAAATTGCGGGGTGCGATGAGAGCGAAGAAGCGTTTCGTGAGGTTTCGGGGATTCCGTTGTTGTCGAGTTTGTTAGAGAGCGAAGGAAGTAGCTTGAGGACGAAGGAGAATGCGGTTTCGGGTTTGTTGAATGTGGTGAGGTGTAGTGGTGAAGAAACGGTTATGGAAGTTAGAGAGAAAACCGTTTCTCTTGCGGCCTTGGATGGGATCGTGTACGTGCAGGACCATGGTAGCGCCAAAGGGAAGAGCAAAGCTGTGGCCTTATTGAAGCTTGTGTTTGATGGGGGAAGCAGTTGTAACAAGAATTGTTGCGATTTGTATCCAGTTGAGCTTGACTCTTAG 960 0.55 MDLKHQTINTHLSNLSSHSHTTRLAALRHLRLLSNQDPAARPIISAAGAIPHLLDALFSSSHSIQDNAAATLLNISISDRLPLLSTHHLLDAIAHLLSSHATSSSPNAVQSAAATLHCLLSFVPEFRPTVGARRDILHYLIGIIESSDSPRRSVKDALKASFGIALHPPNRAIMVQLGAVSALFHLVTKERIKKIGIMEDATAVIAQIAGCDESEEAFREVSGIPLLSSLLESEGSSLRTKENAVSGLLNVVRCSGEETVMEVREKTVSLAALDGIVYVQDHGSAKGKSKAVALLKLVFDGGSSCNKNCCDLYPVELDS* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2586 319 PANTHER U BOX DOMAIN-CONTAINING 2 307 - -
Ahy10g2586 319 Pfam Armadillo/beta-catenin-like repeat 41 76 IPR000225 GO:0005515
Ahy10g2586 319 SUPERFAMILY ARM repeat 12 301 IPR016024 -
Ahy10g2586 319 SMART arm_5 167 210 IPR000225 GO:0005515
Ahy10g2586 319 SMART arm_5 211 253 IPR000225 GO:0005515
Ahy10g2586 319 SMART arm_5 37 77 IPR000225 GO:0005515
Ahy10g2586 319 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 178 223 IPR000225 GO:0005515
Ahy10g2586 319 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 307 - -
Ahy10g2586 319 Gene3D - 5 297 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2586 Ahy-Chr10 115346156 115347552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2586 15 295 U-box Gene Family AT2G23140 32.746 2.37e-23 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2586 - - gmx:100803111 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3147 20 142152190 142153420 Ahy10g2586 10 115346156 115347552 hybridization