Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2544 ATGAAAGCTTCATCTTCTCTTCATCCACACCACCATTTTCCTTCCACTAAACTTTACACTTCCATCACCACAAGAGTTTACATCAGGACTCAACTCTCTTTTCCTGCAAAGGTGTTCTTGTGCCAGGCAAAATCTGGCACAAATGGGTCGATAAACGTGCGAGTGATGCCTCCCACTCTGTTAGCAGCAGAAAAGGAAGAAGCCAAGGCTGTATTGATGCTGTTTTTGAAAAAAGAAGGCTTGAGCAATGCCATTGCAGCGAGAACTGTCAACAAATCAGATCCTTTTATTGATCACCTTGTCTCGGTGCTTCACTCTAAACACAAATCTCGGTACCTCGTAGGGAGAGAACTTACAACACTTGAAATCAGGGATGCTATTGTCCCATACCTTGAATCTCTTCTCGAAGAGCACGGTGATAGTCTAGTCGATGTAGTCGAAAACTATCCAAATCCCCCGGTTAAGGAAAAACCAGCTGTGCAGGTTCCTCCTCCTACTCCAATAATAGACTCTAAGAAGCTTAGAACCGTGTCTCGAGTGAATGCAATAGACATGACTGCTGGCAATCTTCGCCCTCATATTGTCTATCTCATAGAGTTCGGTATGAGTATTGAGCAAATCAATGGTATTATTCGGCGATTCCCGTCTTTTGCCTACTACAGCTTGGAGGGTAAAATTAAGCCTGTAGTTGAGTTTTTTCTTGAACTTGGAGTTCCGAAAGAGGACATCCCCACCATCCTCACTAAAAGGCCTCAATTATGTGGAATCAGCCTGTCGGAAAATCTTAAACCCACCATGAAGTTCTTAGAATCCTTAGGCGTCGACAAGAAACAATGGGCGAAGGTGATATACCGCTTCCCGGCTCTTCTAACTTATAGTAGGGAGAAGGTGGAGGAGAGCATAGATTTTCTCCGAGAATTAGGCCTGTCAGATGATAACATAGGTAAGATCTTAACTCGCTGCCCCAATATTGTAAGTTATAGTGTAGAGGACAACCTACGACCCACGGCTAATTACTTCCGATCCTTGGGAGTGGATGTTGGTGTTCTTCTGTTCCGTTGTCCACAGAATTTTGGTCTTAGCATTGAGGCCAATCTGAAGCCTGTAACACAGTTTTTCTTGGAAAAGGGATACACTTTGGATGAAATTGGGACTATGATTTCAAGATTTGGTGCCTTGTACACCTTTAGCTTGGCAGACAATTTGATTCCGAAATGGGATTTCTTCATCACTATGGGTTACCCAAATTCTGAGCTTGTTAAATTCCCTCAGTTTTTCGGATACAGTTTGGAAGAAAGGATTAAACCAAGATATGCACGGATGAAGAGAGCTGGGGTGAGGTTATTGCTCAACCAGGTTCTGTCACTGTCTAGCCGGAACTTCGAAGAGGCCTTAGAAAAGAAACTGAAAAAGAATTCGAGTTGA 1425 0.433 MKASSSLHPHHHFPSTKLYTSITTRVYIRTQLSFPAKVFLCQAKSGTNGSINVRVMPPTLLAAEKEEAKAVLMLFLKKEGLSNAIAARTVNKSDPFIDHLVSVLHSKHKSRYLVGRELTTLEIRDAIVPYLESLLEEHGDSLVDVVENYPNPPVKEKPAVQVPPPTPIIDSKKLRTVSRVNAIDMTAGNLRPHIVYLIEFGMSIEQINGIIRRFPSFAYYSLEGKIKPVVEFFLELGVPKEDIPTILTKRPQLCGISLSENLKPTMKFLESLGVDKKQWAKVIYRFPALLTYSREKVEESIDFLRELGLSDDNIGKILTRCPNIVSYSVEDNLRPTANYFRSLGVDVGVLLFRCPQNFGLSIEANLKPVTQFFLEKGYTLDEIGTMISRFGALYTFSLADNLIPKWDFFITMGYPNSELVKFPQFFGYSLEERIKPRYARMKRAGVRLLLNQVLSLSSRNFEEALEKKLKKNSS* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2544 474 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Ahy10g2544 474 SMART mt_12 315 346 IPR003690 GO:0003690|GO:0006355
Ahy10g2544 474 SMART mt_12 348 379 IPR003690 GO:0003690|GO:0006355
Ahy10g2544 474 SMART mt_12 384 415 IPR003690 GO:0003690|GO:0006355
Ahy10g2544 474 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Ahy10g2544 474 SMART mt_12 280 310 IPR003690 GO:0003690|GO:0006355
Ahy10g2544 474 SMART mt_12 416 447 IPR003690 GO:0003690|GO:0006355
Ahy10g2544 474 Gene3D Transcription termination factor 3, mitochondrial 251 471 IPR038538 -
Ahy10g2544 474 PANTHER CGI-12 PROTEIN-RELATED 26 472 IPR003690 GO:0003690|GO:0006355
Ahy10g2544 474 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF5, CHLOROPLASTIC 26 472 - -
Ahy10g2544 474 Pfam mTERF 188 376 IPR003690 GO:0003690|GO:0006355
Ahy10g2544 474 Pfam mTERF 168 304 IPR003690 GO:0003690|GO:0006355
Ahy10g2544 474 Pfam mTERF 295 462 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2544 Ahy-Chr10 114936598 114943918 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy10g2544 mTERF 3.60E-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2544 K15032 K12177 gmx:100781900 734.561