Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2531 ATGTTCAGTACCCTTCATATCATCAAGAAGAAAGCTGTTCTGAACATGGATATAGACCTTAGGTTACCTTCTGGTGAACATGATAAAGAGGATGAAGAAACAGCTACAATTGATAACATATTGGATGGTGAAGAAAAATTGAATAATGGAGCTATGGAGGGGAGAAATATGGTTGATCCTGGTATGGAGTTACAAGCTCTAAATGGTGGTGATTTGAATTCGCCCACACTTGATATGGTAATATTCAAGGAAGATACTAATCTTGAGCCACTTTCTGGCATGGAATTTGAGTCTCATGGGGAGGCTTATTCATTCTACCAAGAATATGCTCGTTCAATGGGATTCAACACTGCAATACAGAATAGCCGACGCTCCAAAACATCAAGAGAATTCATAGATGCAAAGTTTGCTTGTTCTAGGTACGGAACAAAACGAGAATATGACAAATCGTTCAATCGACCACGTGCAAGACAGAGCAAGCCCGATTCTGAAAATTCAACCGGTCGAAGATCTTGTTCCAAGACTGACTGTAAAGCAAGTATGCACGTGAAAAGAAAACATGATGGAAAATGGGTTATACACAGTTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCCCAAGCAGTCAGTGAACAAACAAGAAGAATGTATGCTGCAATGGCCAGACAGTTTGCTGAATACAAGACTGTGGTTGGTCTCAAGAATGAAAAGAATCCATTTGATAAAGGACGGAATTTGAGCCTTGAATCAGGAGACGCTAAACTCATGCTGGATTTTTTTGTACAGATGCAAAATATGAACTCTAACTTCTTTTATGCAGTTGATCTTGATGATGATCAAAGACTGAAAAATATTCTATGGATTGATGCTAAAAGTAGGCATGACTATACCAACTTTTGTGATGTAGTGTCATTTGATACCACTTATGTTAGAAACAAATATAAGATGCCTCTTGCACTTTTTGTTGGAGTGAACCAGCACTATCAATTTATACTACTGGGGTGTGCCTTAATATCCGATGAAAGTCCCGCAACTTTTTCTTGGCTGATGCGGATGTGGCTGAAAGGAGTTGGTGGTCAAGTTCCAAAAGTGATGATTACTGAACATGACAAGACTTTGAAGTCAGTTATTGCAGATATATTCCCTAGTGCTTGTCATTGTGTCTCTTTATGGCATATTGTGGGTAAGATATCTGAAAATATGGCTCATGTAATTAAAAAACATGAGAAGTTTTTGGCGAAATTTGAAAAATGCATATACAGGTCATTGACCAGTGATGACTTTGAGAAGAGATGGTGGAAAATTGTTGATAGGTTTGAACTTCGAGAGGATGAATGCATGCAGTCACTATATGAAGATCGTAAGTTGTGGGCACCAACATTCATGAGGGATGTTTTCTTAGGTGGTATGTCTACTGTCCAACGATCGGAAAGTGTAAATTATTACTTTGACAAATATGTTCACAAGAAGACCTCTGTGCAAGATTTTGTTAAATTGTATGAAGCAATCTTGCAAGACAGGTACGAAGAGGAAGCCAAAGCAGATTCTGATACCTGGAATAAAGTAGCAACATTGAAAACTCCTTCGCCGTTGGAGAAGAGTGTCGCAGGGGTTTACACGCATGCTGTATTCAAGAAGATTCAAGCTGAGGTTGTTGGTGCAGTTGCTTGTCATCCTAAAGCTGACAGACAAGATGAGACCACTATTATTCATCGGGTTCACGACATGCAATCAAATAAGGACTTCTTTGTTGTGGTGAATCAAGTAAAATCAGAATGGTCTTGTATATGTCGTTTATTTGAATATAGAGGCTATCTTTGTCGACACATATTGATTGTTCTGCAATATTCTGGCCATTCTGCAATCCCATCCCATTATATTTTGAAACGCTGGACCAAAGACGCAAAGGTCCGGAATATAATGGGAGAAGAGTCTGAACATATGCTGGCAAGGGTGCAACGATACAATGATTTATGTCAGCGAGCATTTAAACTGAGTGAAGAGGGATCTCTTTCACAAGAGAGTTACAGTATTGCAGTCCATGCACTGCACGAAGCACAAAAAAGTTGTGTGAGCGTTAATAATTCTGGCAAGAGTCCCATGGAAGTTGGTACATCAGTCACTCATGCTCAGCTTTCTACTGAAGAAGATACCCAAAGTAGAAATATGGGCAAGTCAAACAAAAAGAAAAATCCAGCTAAAAAGAAAAAGGTGAATGCTGAGGCTGAAATGTTGACTGTTGGAGCAATTGACAACATGCAACAAATGGTTTGTCCTCCCGCTGACAAGTTCAGCACAAGAGCTGCAGTAACCCTTGATGGCTATTACGGCACACAACAACAGGTGCAGGGAATGTTGAACTTAATGGGACCGCGAGATGATTTTTACGGGAATCAGCAGACTCTTCAGGGACTGGGACCAATAAGTTCAATACCAACAAGTCACGACGGTTATTATAGTGCGCACCAGGGCATGCCAAATCTGGCACAATTGGATTTTTTGCGAACAGGTTTCACATATGGCATCCGGGATGATCCGAATGTAAGAGCAGCGCAGTTGCATGAGGATCCGTCGAGGCATGCATGA 2589 0.4029 MFSTLHIIKKKAVLNMDIDLRLPSGEHDKEDEETATIDNILDGEEKLNNGAMEGRNMVDPGMELQALNGGDLNSPTLDMVIFKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQSKPDSENSTGRRSCSKTDCKASMHVKRKHDGKWVIHSFVKEHNHELLPAQAVSEQTRRMYAAMARQFAEYKTVVGLKNEKNPFDKGRNLSLESGDAKLMLDFFVQMQNMNSNFFYAVDLDDDQRLKNILWIDAKSRHDYTNFCDVVSFDTTYVRNKYKMPLALFVGVNQHYQFILLGCALISDESPATFSWLMRMWLKGVGGQVPKVMITEHDKTLKSVIADIFPSACHCVSLWHIVGKISENMAHVIKKHEKFLAKFEKCIYRSLTSDDFEKRWWKIVDRFELREDECMQSLYEDRKLWAPTFMRDVFLGGMSTVQRSESVNYYFDKYVHKKTSVQDFVKLYEAILQDRYEEEAKADSDTWNKVATLKTPSPLEKSVAGVYTHAVFKKIQAEVVGAVACHPKADRQDETTIIHRVHDMQSNKDFFVVVNQVKSEWSCICRLFEYRGYLCRHILIVLQYSGHSAIPSHYILKRWTKDAKVRNIMGEESEHMLARVQRYNDLCQRAFKLSEEGSLSQESYSIAVHALHEAQKSCVSVNNSGKSPMEVGTSVTHAQLSTEEDTQSRNMGKSNKKKNPAKKKKVNAEAEMLTVGAIDNMQQMVCPPADKFSTRAAVTLDGYYGTQQQVQGMLNLMGPRDDFYGNQQTLQGLGPISSIPTSHDGYYSAHQGMPNLAQLDFLRTGFTYGIRDDPNVRAAQLHEDPSRHA* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2531 862 Pfam SWIM zinc finger 590 617 IPR007527 GO:0008270
Ahy10g2531 862 MobiDBLite consensus disorder prediction 701 739 - -
Ahy10g2531 862 PANTHER FAR-RED ELONGATED HYPOCOTYLS 3-RELATED 63 780 - -
Ahy10g2531 862 SMART 26again6 594 621 IPR006564 GO:0008270
Ahy10g2531 862 ProSiteProfiles Zinc finger SWIM-type profile. 583 619 IPR007527 GO:0008270
Ahy10g2531 862 MobiDBLite consensus disorder prediction 701 721 - -
Ahy10g2531 862 Pfam MULE transposase domain 303 395 IPR018289 -
Ahy10g2531 862 MobiDBLite consensus disorder prediction 147 179 - -
Ahy10g2531 862 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 63 780 IPR031052 GO:0006355
Ahy10g2531 862 Pfam FAR1 DNA-binding domain 104 206 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2531 Ahy-Chr10 114838806 114844875 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy10g2531 FAR1 1.20E-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2531 - - gmx:100817034 1517.29