Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2514 ATGGCTTTGAGGATCATAGCAATTTCTGGGGTTTCTACAGTGTTAAGCTTTATTGCTTTGCACTTCTGCTCAGAATTTTCACTATACAAACTCATTTCTGATGGAATAATTAACTTAGACAATAATAATAATATTAATATTAATAGTAATAATATTACCAAGATTGATGAGTTGCCTTTTGATTTTTCCACCACCATTGGGTTGTTGGCGAATTGCTTCATCAATGTTTTCATTCTTATCAATCTTTGTCTCAAGGCTATGTTCTTCACGGAGTTGTATTCTTCTGAAACGCGTAAACTAATTGAACGACTCGTTAATTATATTATTTATAAGGGGACATTTCTACCACTGATTGTGCCACCGACAGTATATCAGGCTGGTCTTTGGTCAACATGGCTGACTGTGCTCTGTTCTTTAAAGATGTTTCAAGCTTTGGCTAGAGATCGTTTGGAGCGGCTGAATGCATCTCCATCTGTGACACCTTGGACATATCTTCGTGTATATTCAGCATTGTTATTCGTTTTCTTCATTGATGTTTTCTGGATAAGGTTTTGTGTGTCAGTATATAGAAGCGATCCATCCTCTCTGCATCTGTTACTATTCTTTGAGCCATTAAGTATTGCTTTTGAGACCCTACAGGCCATTTTGGTGCATGGATTTCAGTTCCTTGACATATGGCTTCCTCATTCAGCTTGCAACAGCAGTGATTGCCAAATGCCTAAATTGTTTAATACACTAACAGCAGGTGTCTTACTGGAATGGAAGGGAACTCTTATTCGGAACTTCGGGTTTTTCCTCGATATGGCAACATTTTTAATGGCACTTGGCCATTACCTGTACATATGGCGTCTTCATGGGATGGCTTTTCATCTAGTAGACGCAGTGTTGTTCCTAAACATACGGGCATTGCTTGGTGCAATTATAAATCGTATAAAAAGCTTCCATAGGTTAAGGATAGCTCTAGGAGCACTTAATGCTGCTCTTCCTGATGCGACAGATGAGGAGTTAAGAGCATACGATGATGAATGCGCTATTTGTAGAGAATCCATGGCTAAGGCAAAAAGGTTAAACTGCAATCACCTTTTCCATCTTGCATGTTTGAGATCTTGGTTGGATCAAGGCCTGACTGAAATGTATACTTGTCCCACATGCCGAAAGCCTCTTTTTCCGGGCCGGTCAGAAAATGAAACAAGCTCCAATGTCGGGGGAATATCTAGTGACGAGCAACTGGTACGCAATACAAATGCAGGACTGGATCGGCAAAACTCTGCTAGAAATACCATGCCTGCAGTATTGTATCCCAATCATATACCAAACTCGGCAGACAATGTCCCTTGGAGGGGTGCAGGACTGGACTCAGGCTGGTTGCATTCTTGGCCAAATCAGGGTATTGATGGAGCTGGTCCATCATCTACAACAATCAGAACGGTTGGATTAGGAAGAGTTCAAATGATGATGAGGCAGCTAACATCTGTGGGAGAAACCTATGCCCAGGGTGCCTTTGAAGATGCTTCCTGGGGCCTCTGGCCTATTAATCCCTCCCAGGCTTCTTCTAGTAATCCTACCGTTTCTGTTGGTGAGAGGCCGTCAGGAGGATCAGGTAGCTTACATAGAAGAAGTGGTTCACAATCTGCAAATGATAATATGGCTAATATTCTTGCTATGGCCGAAACTGTTCGGGAGGTTTTACCTCATATTCCAGATGACATAATATTCCAGGACTTGCAGAGAACAAACTCTGTCACAGTTACTGTGAATAATCTTCTTCAAATGTAA 1776 0.4139 MALRIIAISGVSTVLSFIALHFCSEFSLYKLISDGIINLDNNNNININSNNITKIDELPFDFSTTIGLLANCFINVFILINLCLKAMFFTELYSSETRKLIERLVNYIIYKGTFLPLIVPPTVYQAGLWSTWLTVLCSLKMFQALARDRLERLNASPSVTPWTYLRVYSALLFVFFIDVFWIRFCVSVYRSDPSSLHLLLFFEPLSIAFETLQAILVHGFQFLDIWLPHSACNSSDCQMPKLFNTLTAGVLLEWKGTLIRNFGFFLDMATFLMALGHYLYIWRLHGMAFHLVDAVLFLNIRALLGAIINRIKSFHRLRIALGALNAALPDATDEELRAYDDECAICRESMAKAKRLNCNHLFHLACLRSWLDQGLTEMYTCPTCRKPLFPGRSENETSSNVGGISSDEQLVRNTNAGLDRQNSARNTMPAVLYPNHIPNSADNVPWRGAGLDSGWLHSWPNQGIDGAGPSSTTIRTVGLGRVQMMMRQLTSVGETYAQGAFEDASWGLWPINPSQASSSNPTVSVGERPSGGSGSLHRRSGSQSANDNMANILAMAETVREVLPHIPDDIIFQDLQRTNSVTVTVNNLLQM* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2514 591 MobiDBLite consensus disorder prediction 512 545 - -
Ahy10g2514 591 SMART ring_2 343 384 IPR001841 -
Ahy10g2514 591 Gene3D - 550 590 - -
Ahy10g2514 591 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 6 591 - -
Ahy10g2514 591 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 316 393 IPR013083 -
Ahy10g2514 591 ProSiteProfiles Zinc finger RING-type profile. 343 385 IPR001841 -
Ahy10g2514 591 Pfam CUE domain 555 591 IPR003892 GO:0043130
Ahy10g2514 591 SUPERFAMILY RING/U-box 329 391 - -
Ahy10g2514 591 CDD CUE_RIN3_plant 552 589 IPR035667 -
Ahy10g2514 591 ProSiteProfiles CUE domain profile. 551 591 IPR003892 GO:0043130
Ahy10g2514 591 Pfam Ring finger domain 341 385 IPR001841 -
Ahy10g2514 591 PANTHER E3 UBIQUITIN PROTEIN LIGASE RIN3 6 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2514 Ahy-Chr10 114640281 114649129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2514 69 402 C3H Transcription Factor Family AT3G16090 27.324 1.75e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2514 K10636 - gmx:100819656 909.442