Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2491 ATGGATGCGGAAGATCATAATCATGCTTTGGATTTGCCTCCCGGTTTCAGGTTCCACCCTACAGATGAGGAGATCATCTCTTATTATCTCACTCACAAGGTTTTGAACACAAGTTTCACCGCAACTGCCATTGGAGAAGTTGATCTCAATAAGTGTGAGCCTTGGGACTTGCCTCAGAAAGCAAAGATGGGGGAGAAAGATTGGTACTTCTTCTGGCAAAGAGATAAAAAGTACCCAACTGGGATCAGAACGAATCGAGCCACGGAATCCGGCTACTGGAAGGCCACCGGAAAAGACAAAGAGATTTACAAAGGGAGAAACCTTGTTGGTATGAAGAAAACCCTTGTGTTCTATAGAGGTAGAGCCCCTCATGGACACAAAACCAATTGGGTTATGCATGAATTCAGATTGGAAGGCCTTTTTGCTACTTACAACCTCCCTAAACCTGCTAAGGAGGAATGGGTTGTGTCGAGGGTTTTCCATAAGAACACAACAGAAAAATTGAACCCAACAATTCCATCTGGCCTCTTTAGGATAATGAAGAACGTGAACTCAATTGAGGATGATGATCTTGTAGATTTTTCTTCTCTCCCACCTCTCATGGATCCTTCTAATAATTATGATGATGAACACACCACCACCACCAACAATATGTTTCCATCATCATCAGATTATAATATTACTATTCAGCAAAACAAGAAGGATATGATGGGAGTAAGGAATAATAATATTAGAGCATTATTAATGTACGACGGTCCATCATCATCATCATCAGAAGTAGTTGCTCCTCCTCTCTCTGACTTGGAATTATGCCTCTGGGATTTATAA 828 0.413 MDAEDHNHALDLPPGFRFHPTDEEIISYYLTHKVLNTSFTATAIGEVDLNKCEPWDLPQKAKMGEKDWYFFWQRDKKYPTGIRTNRATESGYWKATGKDKEIYKGRNLVGMKKTLVFYRGRAPHGHKTNWVMHEFRLEGLFATYNLPKPAKEEWVVSRVFHKNTTEKLNPTIPSGLFRIMKNVNSIEDDDLVDFSSLPPLMDPSNNYDDEHTTTTNNMFPSSSDYNITIQQNKKDMMGVRNNNIRALLMYDGPSSSSSEVVAPPLSDLELCLWDL* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2491 275 PANTHER NAC DOMAIN-CONTAINING PROTEIN 87 7 240 - -
Ahy10g2491 275 SUPERFAMILY NAC domain 9 163 IPR036093 GO:0003677|GO:0006355
Ahy10g2491 275 ProSiteProfiles NAC domain profile. 12 162 IPR003441 GO:0003677|GO:0006355
Ahy10g2491 275 Gene3D NAC domain 21 166 IPR036093 GO:0003677|GO:0006355
Ahy10g2491 275 Pfam No apical meristem (NAM) protein 13 137 IPR003441 GO:0003677|GO:0006355
Ahy10g2491 275 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2491 Ahy-Chr10 114423942 114425788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2491 10 204 NAC Transcription Factor Family AT5G18270 72.362 3.64e-101 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy10g2491 NAM 9.40E-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2491 - - aip:107623055 522.316