Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2455 ATGGCTGAGCCACAAGGTGGTGGTGCTGAAGGAAGCAGGCGTAGAAGCACTAGTGCCGCAAGGCGTGGCGCGGCGGCGCCGACGCAAGAGGGAGCGCCGCCGCCATCTCCGAGTAGTCCATGCGGCGCTTGCAAGTTCTTGAGGAGGAAGTGTGTTGCAGGATGCATCTTTGCACCCCACTTTAGCTCGGACCAAGGTGCCGCTAAGTTTGCGGCGGTTCACAAGGTGTTTGGTGCTAGCAATGTGTCGAAGCTTTTGTTGCATGTTCCGGCACACCGCCGCAATGAAGCGGTGGCGACTATTTGTTACGAGGCTCAGGCAAGGCTATCTGATCCGGTTTATGGTTGTGTGTCCACCATTCTCTCTTTGCAACAACAGGTGGCATCTTTGCAAGCAGAGGTGGCTATGACTCAAACTCAAGTGATGAATGGAAGGATTGCATATGCAAGTGTTCTTGACACCACCCAGCAGCAGCAACAGCAACAACAAGCACTACAGCATCACCACCCAAACATGATCAACACTCTGGGGCTGTATCCGGCATTCTCAAACAGCTCATCTGCCTCCACAACTAACCTTATGAACATCACCAACTTCAACCCTGCTACCGGTGGTTTCGACCTCTCAATGGAGGCGGCAACAGCACCCTCATCGTCTCACAGCATTCATCCACTTCATCATAATAGCAATTTCTCTCGCTTGTCTCAATATGATGATGATGATGAACAAGAAAGCAAGATTCCTCCGGTCTTTAACCCTGATCTTTAG 768 0.5169 MAEPQGGGAEGSRRRSTSAARRGAAAPTQEGAPPPSPSSPCGACKFLRRKCVAGCIFAPHFSSDQGAAKFAAVHKVFGASNVSKLLLHVPAHRRNEAVATICYEAQARLSDPVYGCVSTILSLQQQVASLQAEVAMTQTQVMNGRIAYASVLDTTQQQQQQQQALQHHHPNMINTLGLYPAFSNSSSASTTNLMNITNFNPATGGFDLSMEAATAPSSSHSIHPLHHNSNFSRLSQYDDDDEQESKIPPVFNPDL* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2455 255 PANTHER LOB DOMAIN CONTAINING PROTEIN 13 245 - -
Ahy10g2455 255 Coils Coil 120 140 - -
Ahy10g2455 255 MobiDBLite consensus disorder prediction 215 232 - -
Ahy10g2455 255 MobiDBLite consensus disorder prediction 215 255 - -
Ahy10g2455 255 MobiDBLite consensus disorder prediction 1 39 - -
Ahy10g2455 255 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 13 245 - -
Ahy10g2455 255 Pfam Lateral organ boundaries (LOB) domain 40 138 IPR004883 -
Ahy10g2455 255 MobiDBLite consensus disorder prediction 233 247 - -
Ahy10g2455 255 ProSiteProfiles LOB domain profile. 39 141 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2455 Ahy-Chr10 114131982 114134663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2455 1 245 AS2 family AT3G03760 49.421 1.20e-65 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy10g2455 LOB 2.80E-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2455 - - aprc:113866578 242.662