Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2454 ATGTTAATGGCAGAAGAGACAGTTCCCAGAAAAGCCAGCTGCTCCAACGACCCACTTCTCCAATGCGCCGACCTCATCCTTCCATGGCTAACCCCACCGGAACTCGCCGCTGTCTCCATAACCTCTACATCCCTCCACAAGGCCTCCGCCTCCATCACCACCCGCCGATCCTCCGACGCATCTAGAACCTTCGAGAACCTTCCAGTCCCTTTCCGCAACACCGTCGACCACTACCCCTACGCCTACTTCCTCTACACCCCTTCCCTCATCCTTCCCTCCGCCGCATCCCGCCTCCTCCGCCAACCCTGGGGAGCCGCTGCTCCTCTCGCCTCCGCGCCGAGTCGGATCCCCGCGGAATCGGTGAGTTTGGTCGACGAGTTAGGTCAGAGTGTGTTGTCTGGTTGCGACTGCGAGGCTTGTGGCGGTGTGGGTTCCGACTGCCCTTGTTTGGGCTTGGGTGGGCTGGATGACGTGGGCAGTGAGTGCGGGCCGGGATGTGGGTGCGGACCAGAGTGCGGAAACCGGTTGACTCAGAATGGGGTTGCTGTTCGGGTGAAGATTGTGAGGGATGCAAGGAAAGGGTGGTGTTTGCATTCTGACCAGTGGATTCGGAAAGAGGAGTTCTTGTTTGAGTATGCAGTGTATCCAATACATCATACGAATGTAAAACTGATTCATGGTTTCCTGCTTGGAAAAGGCGAACTCTTGACAACCAAGGAAGCGCGGAGGAGACATCAATGTTATGATGAAAAATCATCACATGGTAGATTCTCTTCTGCGCTTTTGGTTGTAAGGGAACATCTTCCATCTGGAAACGTATGCTTGAGATTGAATATTGATGCCACAAGAATAGGAAATGTTGCCCGATTTGTTAATCATTCTTGTGATGGTGGTAACTTAAGCACAAAGCTAATTAGAAGTTCAGGAGCTTTGTTCCCCCGCCTCTGCTTCTTTGCTTCGAAAGATATCCAGAAAGATGAAGAGCTTACATTTAGCTATGGAGAAATCAGGAAAAAGGCCAATGGTCTGCCATGCTTTTGCAGCAGCCCTTCATGCTTTGGAACTTTGCCTTCGGAAGACACTTGA 1086 0.5203 MLMAEETVPRKASCSNDPLLQCADLILPWLTPPELAAVSITSTSLHKASASITTRRSSDASRTFENLPVPFRNTVDHYPYAYFLYTPSLILPSAASRLLRQPWGAAAPLASAPSRIPAESVSLVDELGQSVLSGCDCEACGGVGSDCPCLGLGGLDDVGSECGPGCGCGPECGNRLTQNGVAVRVKIVRDARKGWCLHSDQWIRKEEFLFEYAVYPIHHTNVKLIHGFLLGKGELLTTKEARRRHQCYDEKSSHGRFSSALLVVREHLPSGNVCLRLNIDATRIGNVARFVNHSCDGGNLSTKLIRSSGALFPRLCFFASKDIQKDEELTFSYGEIRKKANGLPCFCSSPSCFGTLPSEDT* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2454 361 Gene3D SET domain 37 342 IPR046341 -
Ahy10g2454 361 ProSiteProfiles Post-SET domain profile. 341 357 IPR003616 -
Ahy10g2454 361 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 16 350 - -
Ahy10g2454 361 SUPERFAMILY SET domain 66 354 IPR046341 -
Ahy10g2454 361 ProSiteProfiles SET domain profile. 183 334 IPR001214 GO:0005515
Ahy10g2454 361 SMART set_7 183 340 IPR001214 GO:0005515
Ahy10g2454 361 Pfam SET domain 194 334 IPR001214 GO:0005515
Ahy10g2454 361 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 16 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2454 Ahy-Chr10 114128532 114131516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2454 161 356 C2H2 Transcription Factor Family AT2G23740 30.542 2.51e-18 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy10g2454 SET 2.90E-14 No_clan