Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2408 ATGTTTGACCGTAATTTTAAGGTTGTCTTATTTATTTACTTGCGCTCTGTCTCTGCAGATTGTTACGACCCTTTGGATCCAAATGGCAACATTTCAGTTACTTTTGACATTTACCAACGCACACAAGATGGATATTTGGCAAGGGTGACACTTGAGAACTACTACCAGTACCGGCATGTAGACAAACCAGGTTGGCAACTTGGATGGCAATGGGCTAATGATGAAGTTATATGGTCAATAAATGGTGCAGTTGCAACAGATCAAGGCAACTGTTCTTCTTACACATCTCAGTTACCACATTCTTGCAAGAAAGATCCTCTCATAGTTGATCTTCCGGCCGATGTGTCACCAGAGAGCAGGTCAGAACACTGCTGCAATGGCGGCATCCTCTCGGCTCGAGCCATCAATCCTTTGAGCTCATTCACCTTGTTTGAGCTTGAAGTACGCAACTTAGGGCAATACCCTCTAGGACAAGCACCTAATAACCTCACACTCTTGGCCCCTGGTCCTGGCTATACTTGTTCCCCTCTTCTTCAGACTGATCCCACTGTCATCTCCTCTTTTAATGGACAAAGACAAGTTCCTGCTCTCAGAACGTGGAAGTCAGCATGTACATACTCCAACTTTATGGCAAATAAGTCACCAATATGCTGTGTATCGCTCTCAACATTTTACAACCCTATGATCACACCATGCCCTGATTGCAGCTGTGGATGCAGTGAAGCAGACAAAGCTTCTAAGTCTTGCATAAGGTTGGGTAATACCTTATCAGAGGAGAACATAATAGCATGCACTAAGCACATGTGCCCAATTCGAGTTCATTGGCATGTTAAGAACAACTATGTAACTCACTGGAGGGTGAAGCTTACCATTTCTAACTACAATTATAGGAGCAACTACTCTAACTGGAATGTGCTTCTCCAACATCCTGCCTTCTCCCAGAATGCAACTTCTTATAGTTTCAACACTGCCAAACTTCCCCTTGCCTTTCAAGATGGAGTTTCTCTGTTTTGGGGGATTGATTATTACAACACCGAACTAGTTCATTCGGATAAGGATCAACAAGGTTTTGTGTCAACAGAGATACTATTAGAGAAAGATCCAAAATCTTTTACATTGAGTAATGGATGGGCTTTTCCTAGGAGGGTCTATTTCAATGGAGAGAACTGTGAAATGCCCTTACCTGACACATTCCCTATGCTTCCAAATCATACCAACACTTTGAGACCTCCCAATATTATTTTACTCATCATCTCTTTATTCTGTTTCTGGACCAAAGCTTCCTTTCATTTTCAGTAG 1299 0.4242 MFDRNFKVVLFIYLRSVSADCYDPLDPNGNISVTFDIYQRTQDGYLARVTLENYYQYRHVDKPGWQLGWQWANDEVIWSINGAVATDQGNCSSYTSQLPHSCKKDPLIVDLPADVSPESRSEHCCNGGILSARAINPLSSFTLFELEVRNLGQYPLGQAPNNLTLLAPGPGYTCSPLLQTDPTVISSFNGQRQVPALRTWKSACTYSNFMANKSPICCVSLSTFYNPMITPCPDCSCGCSEADKASKSCIRLGNTLSEENIIACTKHMCPIRVHWHVKNNYVTHWRVKLTISNYNYRSNYSNWNVLLQHPAFSQNATSYSFNTAKLPLAFQDGVSLFWGIDYYNTELVHSDKDQQGFVSTEILLEKDPKSFTLSNGWAFPRRVYFNGENCEMPLPDTFPMLPNHTNTLRPPNIILLIISLFCFWTKASFHFQ* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2408 432 PANTHER PROTEIN COBRA 11 421 IPR006918 GO:0010215|GO:0031225
Ahy10g2408 432 PANTHER COBRA-LIKE PROTEIN 11 421 - -
Ahy10g2408 432 PIRSF COBRA 2 429 IPR006918 GO:0010215|GO:0031225
Ahy10g2408 432 Pfam COBRA-like protein 45 207 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2408 Ahy-Chr10 113649296 113651796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2408 20 420 COBRA Gene Family AT3G29810 46.602 1.05e-133 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2408 - - ccaj:109801855 629.787