Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2400 ATGATGCTCCTCCAACTTGCTTCAATCACATATTATGTTTTGCTTCTTCCGTCTTTGTTTTTCATGTTCATCCCAACCACCCATGAGCTCCAATCAGATCAGACTCAAGCTTTGTTTCAACTCAGGAAATTACTTGAATACCCTTCCTCTTTGCAACCCTGGCAAAATTACAATGCTGACCTCTGCACCCTTTCTTCATCCCCAAATTTGACCGTTAAATGCGACCATGATTCAGTAACCGAGCTCAAAATCATGGGTGATAAATCTCTCAAGCCATCAACTTTTAATGGATATTCTATTCCCAATCATACACTAAGCCTGAATTTCTCCATTGATTCATTTTTCACCACACTAACAAGGTTAACGAGTTTAAGGGTTCTTAGCTTAGTGTCCTTAGGGTTATGGGGGCCACTACCTGAAATAATTCACCGTTTGTCTTTGCTTGAGGTTTTGGATTTGAGTTCAAATTTCTTGTTTGGTGCTTTACCACCAAAAATATCCACCATGGTAAAGCTTCACACTGTAACACTTGATGGAAATTATTTTAATGCCACTCTGCCTGATTGGTTTGGCTCTTTCTCTAATCTAACAATGTTGAGTTTGAAGAGCAATCAATTCAAGGGTCAATTCCCTGTTTCACTTTGTAAAATTGAGACACTTGAAGTTATTTCTATGCCCCACAATGAGTTGTATGGTGAATTGCCTGATTTAACTGCTCTGACTGCTCTACATGTTTTGGATTTAAGGGAAAACAATTTAGATTCTCAACTACCAATGTTCCCCAAATCAGTAGTCACAGTTCTGTTGAGCAATAATTCCTTACATGGAGAGATTCCTAAGCAATTTGGTGAGTTGGTTCATCTTCAGCATTTAGATCTTTCATCAAATTACCTAAGCAGGGTGCCACCACCTTCCTTGTTCTCCTTGCCAAACATTAGTTATTTGAATTTGGCAAACAATGTGTTTAGTGGTTGCATTCTGGGGAAGCTTACTTGTGGCGGCAAGCTCGGCTTTGTGGATATTTCTGGTAACAAGTTAAATGGTGGACTACCTTCTTGCTTGGCCAATACATCTGATAGTAGAGTTGTTAGATATGGGGGAAACTGTTTGTCTATCGACAATGCTGGTTCGCACGCTCAGCGGAGAGGGTCTTATTGCGAAGAATCTGGCTTGGGGTGGAAGAAAGTCAAGGCGTGGAAAGTAGCGGTGGTGGTGGCCATGGTTGTTGGACTTGTGATTGTGATTCTTGTGTCTGGAGTTTTCATGTGTAAAAAATGTCATCAGATTCAGAGGAAGATAATTAGGCATGATTTGTTGCCTAAGATTCTCCAAGGAAACTCCACTACAGGGGTTTCCTCTGAAATCCTTGCAAATGCAAGATTCATTTCTCAAACAGTGAAACTTGGGTCGCAAACTACTATGACCTGTCGGCAGTTTTCAATAGAAGAGTTGAAGGAAGCTGCAAGAAACTTTGACATGTCAACTTATGTTGGAGAAGGCTCCATAGGGAAGCTTTACAAAGGTAAACTAGAGAATGGATCCCACGTGATGATAAGATCGTTGGCTCTGTCGAAAAAATGCTCAATTCAAAACCTTAAAGCCCGGTTGGATTTGCTCTCAAAGCTTCAACACCCAAATTTGGTTAGCCTTTTGGGTCATTGTATTGAATTCCAGGGACATGATGATTCTAGTTCCAACAAACTCCATCTTGTGTATGAGTATGTGCCAAATGGAAATTATCGGAGCTATTTATCAGAGTTTTCAGCAGGGAAGGCACTTAAGTGGTCTGATAGACTTGCAATTCTAATTGGAGTTGCTAAAGCTGTGCATTTCTTACATACCGGTGTCATCCCTGGTTGTTTCGAAAACCAGCTAAAGACAAAGAATGTTTTGCTTGATGAGCATCACATTCCAAAGTTAAGTGACTATGGAATTGCCATCATTCGAGAAGAAGTAGACAAGCATGAGGCAAAGGGAGAGAAACTAAAATCATGCCAGAGGACAAAAATGGAGAGTGATGTTTATAATTTTGGGTTCATATTGCTCGAATCACTTGTTGGACCGATAGCAAGCGACAAAGGAGAAACATTCTTTGTAAATGAAAAGGCATCCTTTGGCAGTCAAGATGGTAGAAGAAAGATTGTGGATCCATTAGTACTGACCACTTGCTCTCAAGAGTCGTTGTCAATCGCAATATCCATAACAACGAAATGTATATCGCCGGAATCTTCATCCCGTCCCTCTTTCGAGGATGTTCTATGGAACTTGCAGTATGCTGCTCAAGTTCAAGCTACTTCAGAGGCGGATCAAAAATCAGATTCAAACATGATAGGTCCAAGTTTGTAG 2346 0.4054 MMLLQLASITYYVLLLPSLFFMFIPTTHELQSDQTQALFQLRKLLEYPSSLQPWQNYNADLCTLSSSPNLTVKCDHDSVTELKIMGDKSLKPSTFNGYSIPNHTLSLNFSIDSFFTTLTRLTSLRVLSLVSLGLWGPLPEIIHRLSLLEVLDLSSNFLFGALPPKISTMVKLHTVTLDGNYFNATLPDWFGSFSNLTMLSLKSNQFKGQFPVSLCKIETLEVISMPHNELYGELPDLTALTALHVLDLRENNLDSQLPMFPKSVVTVLLSNNSLHGEIPKQFGELVHLQHLDLSSNYLSRVPPPSLFSLPNISYLNLANNVFSGCILGKLTCGGKLGFVDISGNKLNGGLPSCLANTSDSRVVRYGGNCLSIDNAGSHAQRRGSYCEESGLGWKKVKAWKVAVVVAMVVGLVIVILVSGVFMCKKCHQIQRKIIRHDLLPKILQGNSTTGVSSEILANARFISQTVKLGSQTTMTCRQFSIEELKEAARNFDMSTYVGEGSIGKLYKGKLENGSHVMIRSLALSKKCSIQNLKARLDLLSKLQHPNLVSLLGHCIEFQGHDDSSSNKLHLVYEYVPNGNYRSYLSEFSAGKALKWSDRLAILIGVAKAVHFLHTGVIPGCFENQLKTKNVLLDEHHIPKLSDYGIAIIREEVDKHEAKGEKLKSCQRTKMESDVYNFGFILLESLVGPIASDKGETFFVNEKASFGSQDGRRKIVDPLVLTTCSQESLSIAISITTKCISPESSSRPSFEDVLWNLQYAAQVQATSEADQKSDSNMIGPSL* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2400 781 ProSiteProfiles Leucine-rich repeat profile. 287 308 IPR001611 GO:0005515
Ahy10g2400 781 ProSiteProfiles Protein kinase domain profile. 491 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g2400 781 Pfam Leucine rich repeat 265 320 IPR001611 GO:0005515
Ahy10g2400 781 Pfam Leucine rich repeat 171 230 IPR001611 GO:0005515
Ahy10g2400 781 Gene3D Ribonuclease Inhibitor 264 388 IPR032675 -
Ahy10g2400 781 SMART LRR_typ_2 240 262 IPR003591 -
Ahy10g2400 781 SMART LRR_typ_2 285 309 IPR003591 -
Ahy10g2400 781 SMART LRR_typ_2 145 169 IPR003591 -
Ahy10g2400 781 Gene3D Ribonuclease Inhibitor 31 263 IPR032675 -
Ahy10g2400 781 PANTHER INACTIVE LRR RECEPTOR-LIKE KINASE 9 773 - -
Ahy10g2400 781 Gene3D Phosphorylase Kinase; domain 1 453 574 - -
Ahy10g2400 781 PANTHER OS07G0166700 PROTEIN 9 773 IPR045272 GO:0004714|GO:0006468
Ahy10g2400 781 Gene3D Transferase(Phosphotransferase) domain 1 575 778 - -
Ahy10g2400 781 Pfam Protein tyrosine and serine/threonine kinase 494 753 IPR001245 GO:0004672|GO:0006468
Ahy10g2400 781 SUPERFAMILY L domain-like 118 370 - -
Ahy10g2400 781 SUPERFAMILY Protein kinase-like (PK-like) 470 760 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2400 Ahy-Chr10 113564957 113568899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2400 15 701 Miscellaneous Gene Families AT5G14210 55.222 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Ahy10g2400 PK_Tyr_Ser-Thr 3.70E-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2400 - - gmx:100799183 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2953 20 140329542 140333489 Ahy10g2400 10 113564957 113568899 hybridization