Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2343 ATGAGGATGAGTTGTAACGGATGCAGAGTGTTGAGGAAAGGGTGCAGCGAGGATTGTACCATAAGACCGTGTTTGGATTGGATCAAGAGCGCAGAGTCTCAAGCCAATGCTACTCTCTTCCTTGCTAAGTTCTATGGCCGCGCTGGTCTCATCAACCTCATCAACGCTGGCCCCAATCACCTTCGTCCTGCGGTTTTTCGTTCGTTATTATACGAGGCATGCGGGAGAATAGTGAACCCGATTTATGGATCGGTGGGTTTGTTGTGGTCGGGGAGCTGGCAGCTCTGCCAAGCCGCCGTCGAAGCGGTTTTGAAGGGACTGCCGATCACGCCGATAAATTCGGAGCTGGCGGAGAGCGGACGGGGTCCACCTTTCAAGGCTCATGACATACGCCACGTGTCCAAGCCTCATAACAACACCGTAACCGTCGCGTCTCACGAAACTAAGCGAGTCAAGACTCGCTCCCGAATCAAGAAGCCCAAGGTGGCCGAGGTTGCGAAGCGCGCGTCGAGTCACGAGTCATCGCTGAGCCACGAACGGATGGAGGCGGTTGCTACGGCGGCGGAAGGAGAGAGCAAGGAGATCGAAAGTGACGTGTCGGTGGAGACGACTACGACTACGACTACGGTTCGGTTCCATGACGAACCGGATTCTGATGCAAAGGGGAGGGGTGGTTCGGCCGAAGTCTGCGGGAACGAGGTTGGGTTGGAGCTGACGCTGGGGTTTGAAACGGTGTCACGTGAGCATCATGACGTTGTGGTGCCAATGAAGAAGAGGAGAATTGATTTGAAGGATTTTTGTGGCGGGGTAAGTAGTGATAACGGTTCGTGCAAGATGGAGTTGGGACTTCAGTTCCAGGCTTTCAACGGTTCAGTTTTGACTTGA 885 0.5424 MRMSCNGCRVLRKGCSEDCTIRPCLDWIKSAESQANATLFLAKFYGRAGLINLINAGPNHLRPAVFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGLPITPINSELAESGRGPPFKAHDIRHVSKPHNNTVTVASHETKRVKTRSRIKKPKVAEVAKRASSHESSLSHERMEAVATAAEGESKEIESDVSVETTTTTTTVRFHDEPDSDAKGRGGSAEVCGNEVGLELTLGFETVSREHHDVVVPMKKRRIDLKDFCGGVSSDNGSCKMELGLQFQAFNGSVLT* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2343 294 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 284 - -
Ahy10g2343 294 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 284 - -
Ahy10g2343 294 MobiDBLite consensus disorder prediction 158 180 - -
Ahy10g2343 294 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Ahy10g2343 294 MobiDBLite consensus disorder prediction 144 180 - -
Ahy10g2343 294 PIRSF AS2 1 154 IPR017414 -
Ahy10g2343 294 PIRSF AS2 140 284 IPR017414 -
Ahy10g2343 294 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2343 Ahy-Chr10 113000052 113001290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2343 1 283 AS2 family AT3G02550 56.164 6.16e-101 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy10g2343 LOB 3.20E-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2343 - - aprc:113867933 355.525