Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2329 ATGTTTCCTTCCACTACTTACAGTTACAGCACTGGCCCTTACCCTTGCTTCCCTTCATCTTCTTCTTCATATCCTCTTTTTCCTTTTCTGAACCCTGAGAACAATGCTTCTTCTTCTTCTGCAACAACCGCCACTAACAACAACAACAACAATAATCTCCTTCATGATCCATCGCTCTGCGTTCCTTACATTCCAATCCCTGAAGCACTAACCAATTTGGCAACAGTTGTAGATAACACTACTAATCTTGCTGCATCTTCATCAATGCCCAAACAACAGGACCTCAACGGTGGCGGTGGCGGAGGTGCTCATCATCACTTCGGCATATCCAGTTTGCTCACGAAGAAACCGGCGGCGGCGAAGAAAGATAGGCACAGCAAGATTTACACTGCTCAGGGGCTGAGGGACCGAAGGGTGAGGCTGTCGATTGAGATCGCGCGCAAGTTCTTCGATCTCCAAGACATGCTAGGGTTTGATAAGGCCAGCAACACGCTCGACTGGCTCTTCACCAAGTCCAAGAAAGCCATTAAGGAGCTTGCCAGGAGCAAGAACCACAGCGCCAGTGACGAAGCCGAAGCCAAAGCCGGTGCCGGTGCCGGTGCCAATAACAAGAGTTTCGCCTCGTCCTCTGACTGCGAAGAAGATGACTTTGAAGTACTTTCTAGAAACAACCACCACCGCCACCAACAAGGGTCAGATGCCAGGGAGAGGAAGCTGAAAAATGCACAACAGAAAGAAGCAAGTGCTTGTAATGTGAGGGCAAAGATGAAGGAGTCAAGGGAGAAAGCAAGAGCAAGAGCAAGAGAAAGGACTAGTAACAAGATGTGTAACAGCATAATGGGAAATTCTTCTTCTTCTTCCGGGAAGGTTCTAGAATTAAAGAAAAGATGCCCTGCACCTAGTGAAAACCCTCACCACCTAGGTGGTGCTGAAGTTTCACAAACTAGAGATGACTTCAACGTTATTGAGGAATCCATTGTGATCAAGAGGAAGTTAAAGCAGCCATCTATGATGTCATCCTCACATCACCATCACCATCACCACCACCAATTAAACCTTCCCGTCCCTAACAATAATAAGGAAGCAAGTTTCAACAACAACAGCGATAATTACCATCCAGGAAACTACACCAATTTGTCACCAAATTGGGATAATGCTAATGGACCAGCCTCAACGGCTAATAACCGCTCCAACTTCTGTGCAATAGCCAGCATGAATCTCTCTACAGGGCTACAAATCTTTGGAAAGTCATGGGAGGAATGCACCAATCCATCACGTCTGCACTAG 1287 0.4685 MFPSTTYSYSTGPYPCFPSSSSSYPLFPFLNPENNASSSSATTATNNNNNNNLLHDPSLCVPYIPIPEALTNLATVVDNTTNLAASSSMPKQQDLNGGGGGGAHHHFGISSLLTKKPAAAKKDRHSKIYTAQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKELARSKNHSASDEAEAKAGAGAGANNKSFASSSDCEEDDFEVLSRNNHHRHQQGSDARERKLKNAQQKEASACNVRAKMKESREKARARARERTSNKMCNSIMGNSSSSSGKVLELKKRCPAPSENPHHLGGAEVSQTRDDFNVIEESIVIKRKLKQPSMMSSSHHHHHHHHQLNLPVPNNNKEASFNNNSDNYHPGNYTNLSPNWDNANGPASTANNRSNFCAIASMNLSTGLQIFGKSWEECTNPSRLH* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2329 428 MobiDBLite consensus disorder prediction 181 209 - -
Ahy10g2329 428 Pfam TCP family transcription factor 120 277 IPR017887 -
Ahy10g2329 428 ProSiteProfiles R domain profile. 257 274 IPR017888 -
Ahy10g2329 428 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 426 IPR005333 GO:0003700
Ahy10g2329 428 MobiDBLite consensus disorder prediction 223 258 - -
Ahy10g2329 428 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 24 426 - -
Ahy10g2329 428 MobiDBLite consensus disorder prediction 223 243 - -
Ahy10g2329 428 ProSiteProfiles TCP domain profile. 121 179 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2329 Ahy-Chr10 112845246 112847557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2329 119 276 TCP Transcription Factor Family AT1G67260 43.713 3.49e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy10g2329 TCP 7.10E-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2329 - - gmx:100801549 332.413