Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2295 ATGATGAGGGAAGGAACAAACATCAATATTGGCGGGAGTTGCAGCTCCACCAACAACTGGTCACGTGCCTGCGACACGTGCCGCTCTGCACCCTGCGTGGTGTACTGCCGCGCGGACTCTGCCTATCTCTGCTCCGCATGTGACGACAGAGTCCACGCGGCAAACAGGGTGGCGTCGAGGCACGAGCGCGTGTGGGTCTGCGAGGCCTGCGAGCGTGCTCCGGCAGCCTTCCTCTGCAAAGCCGACGCCGCCTCTCTCTGCTCCTCCTGCGACTCCGACATCCACTCCGCCAACCCCCTTGCCGGCCGCCACCACCGCGTCCCCATTCTCCCCATCTCAGGCTGCTCCTCGCTCATCCGAGAAGGAGAACAAAAAGAAGGAGAACCAGAAAGAGAAAATGATCACGTGTTTGAAATTGAAGGTACAATTAATAATCAGAATTATAACCATGGATGTGAAATGGAGGATGAGGAGTGTGAGGGTGATGATGAGGCTGAAGCTGCTTCGTGGTTGTTGCCGCATCCTGTGAGGATGGGTGGTAACGATGAGAGTGATGGGTTCTTGTTTTGTGGTGGCGACGGTGACGGCGATGGTGATGAGTACTGTTGGTACTTGGAGTTTGTGGATTGTGATGACGATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGACAGCGTGGTTCCGGTTCAGATGCAACAGTGTTTCGAGTTTGACTCCTCTAAAGTTGGTGCTGGATTCAGTTACAATGGTTCTCTTAGTCAAAGTGTTTCAATGTCATCCATGGAAGTTGGAGTTGTACCAGAATCAACGTTGAGTGATGTGTCAATCTCACATTCAAAGCCACAAATAGGAACAAGTGAGCAATTTCCTCCAATGCCTATGCCTTCATCACTTCTAACTCCAATGGACAGAGTAGCCAGAGTTCTAAGATACAAAGAGAAAAAGAAAACAAGAAAGTTTGAGAAGAAAATAAGATATGAATCAAGAAAGGCCTATGCAGAAACCAGGCCACGTATTAAGGGTCGTTTTGCAAAGAGAACAGATGTAGAAGCTGAAGTTGATCAAATGTTATCATCAACCCTAATGTCAGAAGCTGGATATGGCATTGTTCCTTCCTTCTGA 1137 0.4749 MMREGTNINIGGSCSSTNNWSRACDTCRSAPCVVYCRADSAYLCSACDDRVHAANRVASRHERVWVCEACERAPAAFLCKADAASLCSSCDSDIHSANPLAGRHHRVPILPISGCSSLIREGEQKEGEPERENDHVFEIEGTINNQNYNHGCEMEDEECEGDDEAEAASWLLPHPVRMGGNDESDGFLFCGGDGDGDGDEYCWYLEFVDCDDDNNNNNNNNNNNNNNNDSVVPVQMQQCFEFDSSKVGAGFSYNGSLSQSVSMSSMEVGVVPESTLSDVSISHSKPQIGTSEQFPPMPMPSSLLTPMDRVARVLRYKEKKKTRKFEKKIRYESRKAYAETRPRIKGRFAKRTDVEAEVDQMLSSTLMSEAGYGIVPSF* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2295 378 MobiDBLite consensus disorder prediction 281 303 - -
Ahy10g2295 378 Pfam B-box zinc finger 64 109 IPR000315 GO:0008270
Ahy10g2295 378 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 18 378 IPR045281 GO:0009909
Ahy10g2295 378 MobiDBLite consensus disorder prediction 281 298 - -
Ahy10g2295 378 Pfam CCT motif 309 351 IPR010402 GO:0005515
Ahy10g2295 378 ProSiteProfiles CCT domain profile. 309 351 IPR010402 GO:0005515
Ahy10g2295 378 CDD Bbox1_BBX-like 23 66 - -
Ahy10g2295 378 SMART bboxneu5 19 66 IPR000315 GO:0008270
Ahy10g2295 378 SMART bboxneu5 67 109 IPR000315 GO:0008270
Ahy10g2295 378 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 1 18 378 - -
Ahy10g2295 378 ProSiteProfiles Zinc finger B-box type profile. 19 66 IPR000315 GO:0008270
Ahy10g2295 378 CDD Bbox1_BBX-like 66 109 - -
Ahy10g2295 378 ProSiteProfiles Zinc finger B-box type profile. 62 109 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2295 Ahy-Chr10 112366091 112369290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2295 1 378 C2C2-CO-like Transcription Factor Family AT3G02380 48.762 2.13e-110 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Ahy10g2295 zf-B_box 1.90E-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2295 - - ahf:112717988 671.389