Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2278 ATGCTATATTTGGAATCACCAGCTGGAGTTGGTTTCTCATACTCTAGCAATAAATCTTTCTATGACTTGGTTACAGATGAGATAACAGCAAGGGATAACCTTATATTCTTAGAGCGCTGGTTTGCTAAATTTCCTGAGTATGCAAAAAACGAGTTCTTCATTACTGGGGAGAGCTATGCAGGTCACTATGTTCCACAACTTGCATTTCTTGTTATTCAATCCAACGCCACCTTCAATGTTAATCTTAAGGGAATAGCGTTAGGGAATCCTCTACTGGATTTTAATGTTGACCTGAATTCGGAAGCGGATTATTTATGGTCTCATGGGCTAATATCTGATTCGACATACGAACTATACAATACGATATGCAACTCTTCTCAATATATGAGAGAATCTATAGATGGAAAGATTAGTGGTGATTGTGCAAGAGTAAATAATGCATCGTCCACCGAGATATCCGATTATGTTGATCAATATGATGTCACTCTTGATGTTTGTTTGTCACCAGCCAAACAACAAGTTTATATGCTCACAAATCAAATGCATGCTACACAAAATATAGATGTTTGTGTGGGAGATAAATTAGTGGTATACTTAAATAGGAAAGATGTGCAACAAGCACTCCATGCTAGACTTGTTGGAGTTACCAAATGGTCAACTTGCAGCACGGTTCTGAATTATGACTATCGTAATCTAGAAATACCAACACTTCCTCTTCTAGGTACATTTGTTGAGTTGGGTATTCGGGTTCTCGTATACAGTGGAGACCAAGATTCAGTGATCCCATTAATTGGATCAAGATTTCTGGTGAATGCATTAGCCAAAGAAATTGGACTCAATACAACAGTGCCCTATGGAGTCTGGTTTCAGGGAAAACAGGTAGCGGGATGGACACAAGAATATGGCAAGATATTATCATATGCGACGATTAGAGGAGCATCTCATGAAGCTCCATTCTCTCAACCAGCCAGATCGTTAGTGCTACTTCAAGCATTTCTTCAAGGAAAACCACTTTCCAATAATATATGA 1029 0.3858 MLYLESPAGVGFSYSSNKSFYDLVTDEITARDNLIFLERWFAKFPEYAKNEFFITGESYAGHYVPQLAFLVIQSNATFNVNLKGIALGNPLLDFNVDLNSEADYLWSHGLISDSTYELYNTICNSSQYMRESIDGKISGDCARVNNASSTEISDYVDQYDVTLDVCLSPAKQQVYMLTNQMHATQNIDVCVGDKLVVYLNRKDVQQALHARLVGVTKWSTCSTVLNYDYRNLEIPTLPLLGTFVELGIRVLVYSGDQDSVIPLIGSRFLVNALAKEIGLNTTVPYGVWFQGKQVAGWTQEYGKILSYATIRGASHEAPFSQPARSLVLLQAFLQGKPLSNNI* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2278 342 SUPERFAMILY alpha/beta-Hydrolases 1 338 IPR029058 -
Ahy10g2278 342 PANTHER CARBOXYPEPTIDASE 1 338 - -
Ahy10g2278 342 ProSitePatterns Serine carboxypeptidases, histidine active site. 305 322 IPR033124 GO:0004185
Ahy10g2278 342 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Ahy10g2278 342 ProSitePatterns Serine carboxypeptidases, serine active site. 54 61 IPR018202 GO:0004185
Ahy10g2278 342 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 1 338 IPR001563 GO:0004185|GO:0006508
Ahy10g2278 342 PRINTS Carboxypeptidase C serine protease (S10) family signature 305 318 IPR001563 GO:0004185|GO:0006508
Ahy10g2278 342 PRINTS Carboxypeptidase C serine protease (S10) family signature 40 65 IPR001563 GO:0004185|GO:0006508
Ahy10g2278 342 PRINTS Carboxypeptidase C serine protease (S10) family signature 4 14 IPR001563 GO:0004185|GO:0006508
Ahy10g2278 342 Pfam Serine carboxypeptidase 1 335 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2278 Ahy-Chr10 112086784 112091294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2278 198 338 Calmodulin-binding Proteins AT2G22960 31.206 1.29e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2278 K16297 - gmx:100800430 505.368