Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2254 ATGCTTAATTGTGAGAGTGAGTCACTTGTACAAAAAGCCATAGAAGAACATGGAAGGGGAAGAATAGTTGAGACATTGAAGGAGATAGAGGAGAGGCACGATGCAGTGAAAGAGATAGAGAGGAGGCTGATGGAGTTGCAGCAAGTGTTCTTGGACATGTTAGTGTTGGTGCAATCTCAAGGGGAACAACTTAATGACATCGAAAGCTTTGTCACAAAAGCTAACTCCTTCGTGGAGAGCGGTACTCGGCAGGTGGAGGTGGCGGTGAAGACCCAGAAGAGTACCCGCAAATGGACATGCTATGCCATTATCCTTATTATTCTCATCATCTTCCTCCTCCTCTTGCTCCTCAAACCATGGCAACCTAATAAGGGAGTTCAACTCACCCATGCTGTTCCTAAAACTTTATAG 411 0.4526 MLNCESESLVQKAIEEHGRGRIVETLKEIEERHDAVKEIERRLMELQQVFLDMLVLVQSQGEQLNDIESFVTKANSFVESGTRQVEVAVKTQKSTRKWTCYAIILIILIIFLLLLLLKPWQPNKGVQLTHAVPKTL* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2254 136 Pfam Syntaxin 1 61 IPR006011 GO:0016020
Ahy10g2254 136 SMART tSNARE_6 21 88 IPR000727 -
Ahy10g2254 136 Coils Coil 29 49 - -
Ahy10g2254 136 SUPERFAMILY SNARE fusion complex 23 93 - -
Ahy10g2254 136 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 26 88 IPR000727 -
Ahy10g2254 136 CDD SNARE_syntaxin1-like 25 86 - -
Ahy10g2254 136 Pfam SNARE domain 62 114 IPR000727 -
Ahy10g2254 136 Gene3D - 22 118 - -
Ahy10g2254 136 ProSitePatterns Syntaxin / epimorphin family signature. 32 71 IPR006012 GO:0005484|GO:0006886|GO:0016020
Ahy10g2254 136 PANTHER SYNTAXIN 4 121 IPR045242 -
Ahy10g2254 136 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 4 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2254 Ahy-Chr10 111700544 111701539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2254 5 119 SNARE and Associated Proteins AT1G61290 63.478 1.01e-47 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2254 K08486 - adu:110276988 243.432