Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2253 ATGAATGACCTTTTGGCTAGCAAATCCTTCGTCTCACGCAATGGCTCGCCGGACGACCATGCCATCGAAATCAACCCCGGCGCGGCGGGAGCCACCCTAGACCAATTCTTCGCCGACGTGGAGGCGACGAAAGATGAAATGAAGAATCTAGAGAACATTTTCCAGAGCCTCAAAAGCCTCAACGAAGAGAGCAAAACCCTTTACGACGCCACCGCCGTGAAGGACCTCCGTTCACGTATGGACGCTGACGTGGCACTTGCCCTCAAGAAAGCCAAGTTCATCAAGCTCAAGCTGGAGACTCTCGAAAGTTCCAACGCCTCCTCCCGCCGCGTCCCCACCTGTGGGCCTGGCTCCTCCTCCGACCGCACACGGATGTCCGTCGTGCATGGGCTGAAGATGAAGCTGAAGAACTCCATGGACGCCTTCAATGGGCTCAGGAACCAGATCTCGGCGGAGTATCGGGACACAGTACAGCGCCGGTATTTCACGATTACCGGCGAGAAACCCGATGAGAAGACCGTTGAGATATTGATCTCCACGGGTACATAA 549 0.5556 MNDLLASKSFVSRNGSPDDHAIEINPGAAGATLDQFFADVEATKDEMKNLENIFQSLKSLNEESKTLYDATAVKDLRSRMDADVALALKKAKFIKLKLETLESSNASSRRVPTCGPGSSSDRTRMSVVHGLKMKLKNSMDAFNGLRNQISAEYRDTVQRRYFTITGEKPDEKTVEILISTGT* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2253 182 PANTHER SYNTAXIN-121 19 181 - -
Ahy10g2253 182 CDD SynN 33 182 IPR006011 GO:0016020
Ahy10g2253 182 PANTHER SYNTAXIN 19 181 IPR045242 -
Ahy10g2253 182 SUPERFAMILY t-snare proteins 33 180 IPR010989 GO:0016020|GO:0016192
Ahy10g2253 182 SMART SynN_4 28 154 IPR006011 GO:0016020
Ahy10g2253 182 Pfam Syntaxin 35 181 IPR006011 GO:0016020
Ahy10g2253 182 Coils Coil 33 60 - -
Ahy10g2253 182 Gene3D - 31 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2253 Ahy-Chr10 111699647 111700603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2253 25 181 SNARE and Associated Proteins AT3G11820 61.635 4.63e-67 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2253 K08486 - jre:108982862 220.32