Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2232 ATGCTGCTGCTGCTACTGGGTGCTATATATGCATCATGCATGCTTTTCTGCATCTGGAAATCATCTTTTGGATCGATTCGAACGGTGTATATGGCGAAGCAAAGTGTTTATCCTAATAAGGAACATGAAGGGATTGCTCACAATTCTTCAGGGCCCTGGTGGAGTCTCTTTGGATCTCAATATGGGGAATCTTGTGGCCAAATGAAACCCTTTTCACTGGAGATTCCTAACTATGTTGATCAAATTGACACCGGCAAGCAATCGGCGAGAGGAGCTGAAAACATATCTGGGAAAGGACATACAACTCAGTTTACCATCTTTCCAGATGATTGTAAAATGCCATGTGGTGCACAAAAGCCTCAAGCAGCCATATCTCTGCAGTCACCACTTGCTGATACCAACACTAGATTCGAGCTAGGATTCAACCAGCCAATGATCTGTGCAAAATATCCATATATGGATCAAATTTATGGGCTCTTCTCACCTTATGGACCTCAAATTTCGGGACGCATAATGCTGCCACTTAGCATGGCATCCGATGATGGACCAATTTATGTGAATGCTAAGCAGTACCATGGAATCATCAGACGCCGGCAGTCCCGTGCCAAAGCTGTACTTGATAACAAATTGACAAAACGTCGCAAGCCATATATGCATGAATCACGTCATCTCCATGCAATGCGGCGACCAAGAGGATGTGGCGGTCGCTTCTTGAACACGAAGAATTCCGATGATCAAAATGATAAAAGTGGAAACAAAGTGATCAAAGCTCTTGGCGAACAGTTGCAATCTTGTGGCTCTCAGAGTTCTGAGGTGCTGCAATCTGAGGTTGGAACTCTGAATTCTTCAAAAGAGACTAATGGAAGCAGTCCGAATATTTCCGGGTCAGAGGTGACTAGCATGTATTCACGCGGAGGTCTCGATAGTTTTGCTATCAGTCATCTTGGTTCTGCCGTCACTGTCCACTCTCTAGTGGACATGATAGACGGCGGGAGGGGCATGAATATGATCATGCCCCCCAAATGGGTTGCAGCAGTTGGTGGCAATTGCTGCAACCTTAATGCTTGA 1068 0.4532 MLLLLLGAIYASCMLFCIWKSSFGSIRTVYMAKQSVYPNKEHEGIAHNSSGPWWSLFGSQYGESCGQMKPFSLEIPNYVDQIDTGKQSARGAENISGKGHTTQFTIFPDDCKMPCGAQKPQAAISLQSPLADTNTRFELGFNQPMICAKYPYMDQIYGLFSPYGPQISGRIMLPLSMASDDGPIYVNAKQYHGIIRRRQSRAKAVLDNKLTKRRKPYMHESRHLHAMRRPRGCGGRFLNTKNSDDQNDKSGNKVIKALGEQLQSCGSQSSEVLQSEVGTLNSSKETNGSSPNISGSEVTSMYSRGGLDSFAISHLGSAVTVHSLVDMIDGGRGMNMIMPPKWVAAVGGNCCNLNA* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2232 355 Gene3D - 180 242 - -
Ahy10g2232 355 MobiDBLite consensus disorder prediction 228 251 - -
Ahy10g2232 355 SMART cbf3 179 240 IPR001289 GO:0003700|GO:0006355
Ahy10g2232 355 PRINTS CCAAT-binding transcription factor subunit B signature 214 237 IPR001289 GO:0003700|GO:0006355
Ahy10g2232 355 PRINTS CCAAT-binding transcription factor subunit B signature 183 205 IPR001289 GO:0003700|GO:0006355
Ahy10g2232 355 ProSiteProfiles NF-YA/HAP2 family profile. 180 240 IPR001289 GO:0003700|GO:0006355
Ahy10g2232 355 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 183 237 IPR001289 GO:0003700|GO:0006355
Ahy10g2232 355 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 35 354 IPR001289 GO:0003700|GO:0006355
Ahy10g2232 355 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR 35 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2232 Ahy-Chr10 111351572 111355718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2232 16 353 CCAAT-HAP2 Transcription Factor Family AT3G05690 43.380 1.47e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Ahy10g2232 CBFB_NFYA 9.00E-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2232 K08064 - gmx:100527677 481.87