Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2172 ATGAAAGAGATAGATTCATCATCATCAGATCTTGCAGCTGGCCTGGTTTCAAGAACAACAAGAAGTGATGAAAAAGCAATTAGTAAGGGTCCATCACCATCATCATCACATCAATGGCTAAGATTGAAGGATCCGCGGATCGTACGGGTATCAAGAGCGTTGGGAGGAAAAGACAGACACAGCAAGGTTTGCACAATAAGAGGGCTAAGAGACAGAAGGGTAAGGCTTTCAGTTCCCACAGCAATTAACCTCTATGATCTTCAAGACAGGTTAGGGCTCAATCAACCAAGCAAGGTTGTTGATTGGTTACTCAATGCTGCTAAGCATGAAATTGATGACCTTCCCCCTCTTCCCATTCCTCCTTCCAATTTTACCCTTGCTTGTTATCCCTCTCTTCCTACTAATAAATCTAATCATAAAGAGCAGGATAGTAGTAATAATAGTACTAGTGCACATGTTTTGCCTAATACTTTTTTATTACCAACAACAATAAACCATAATCATCATCCTCCTTCATTCTTGGGATTATTGAACACTATGCCATCATCAATTGGTAATCCTTTTTACCAATCAGCTTCTCATGATGATGTTGCTCATCAATTATTGGGGAATAATAATAGTAATAATAATAATAATCTTGGATTTGTGAACCAAACAGATTTACATGGTGGGGTTAATGTTGTAAATTTACCCTTTCAAAACTTAGGAGCTTCTCAAATATTGTGTTGTTCTCCTTCTCCTCTTCAACGTGCGGCGGCCGCGGCGACGACCACCGCGACAACAACACAGTCATATTTTTCTCCTTCTTCTCTTTCGCATTATAATAATGATAATGTTGCTGCAGCAATGGAAATAATGGATCCAAGGCAAATCAACCACCACCATCAGATGATGATGGTGATGAGTAATCATCAGAATCTTGCAACATCACCTACTAGAAGTGAAAGCCAATCTCATGCTGATGATAGTGCAAATTAA 978 0.3926 MKEIDSSSSDLAAGLVSRTTRSDEKAISKGPSPSSSHQWLRLKDPRIVRVSRALGGKDRHSKVCTIRGLRDRRVRLSVPTAINLYDLQDRLGLNQPSKVVDWLLNAAKHEIDDLPPLPIPPSNFTLACYPSLPTNKSNHKEQDSSNNSTSAHVLPNTFLLPTTINHNHHPPSFLGLLNTMPSSIGNPFYQSASHDDVAHQLLGNNNSNNNNNLGFVNQTDLHGGVNVVNLPFQNLGASQILCCSPSPLQRAAAAATTTATTTQSYFSPSSLSHYNNDNVAAAMEIMDPRQINHHHQMMMVMSNHQNLATSPTRSESQSHADDSAN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2172 325 MobiDBLite consensus disorder prediction 306 325 - -
Ahy10g2172 325 Pfam TCP family transcription factor 56 166 IPR017887 -
Ahy10g2172 325 MobiDBLite consensus disorder prediction 1 39 - -
Ahy10g2172 325 ProSiteProfiles TCP domain profile. 56 114 IPR017887 -
Ahy10g2172 325 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 21 314 - -
Ahy10g2172 325 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 314 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2172 Ahy-Chr10 110274482 110276362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2172 39 126 TCP Transcription Factor Family AT3G02150 80.682 1.11e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy10g2172 TCP 7.80E-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2172 - - adu:107471262 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2682 20 136592246 136593753 Ahy10g2172 10 110274482 110276362 hybridization