Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2144 ATGAGTTTTCCAGACACTTCCGGCGCCGCCACCGCCGTGGTGGCGGTCGCATCGTCCGGCCGCCGCGGCATCGGACTTTCGAACACTATCCACTCCGAGGTCGCTCCCTGCCTGCCGCTGCCTTCTCTTCCGGTGTTCTGCGGCTCCTCCGATCGGGACCTCCGCCTAGTTGACTCGCCAGCGATGCTGAACCGTGTCGACGTGCTCGCACAGGCTGGAAAGATCGCTGAGCTGCTCCAGCACACCGATGTGTCGTACTTAAACTTAAGAGATGATAACGGCAGTGGTTCATATATGTACATTGAGCCATTGGAACTCCATGATGAGGTTCTCAGGTGCAATCCTGAAGCATTTGAATACAGTACCACAGGTCCTGTCAAGGAGCAGATCTCTGGTCGTGCGGTGGGTGAGAAGAAGCTCCGTGAGTCGAGTCTTCCTGGCATAAATCAAACTAAAGAAGACTACAATGCAACCCCTAATCGTCAACATGACCATTTTTCTTCAAATGACATTTCAACGTTATCTTCCAAAAAATCAAAAGTAAGGAAGAAAGGAGGCGATGGAATTTCTGTAGGGCCCAGTTCTGCCGAGCTTCAAGATGCAACCATTGGAAGGTTTTGTGAGTTTTTGGAAGACTTATGCAGCAAAGCTGAAGTTCAGACTGATGATCGAGATGAAGCAGAATGGCTGCCATTGTCACTTTCAGATCTTAGATTGCTTGTTAATGAAATAATGTCTATACATGAGAAGAAACTAATGCATATTGTTCCTGTTGAAGTCCTTGTGAGGATACTGAATGTTCTAGATCATCAAATACATAGGGCAGAAGGCCTGTCAATTGAGGATTGTGATAATTCAGACTCGGAACTAATTTCATCTATTTTGATCGCATTGGAGTCCATTCATGCTGCACTAGCTGTGATGGCTCACACTGAGATGCCGAAGCAAATTTATAAAGAAGAGATCATTGAGAGAATTTTGGAGTTTTCCAGGCGTCAAATAATGGATGTTATGTGTGCAAGTGATCCATCGTATCGTGCGTTACACAGACCTAGTGAAAACACTGCATGTGAAGTTGATGATTATTATGAAGAAAATGATGCAGAATTTGGTTCGGCAAGCAAGAAACGTCGTACCAGCAAGAGTACAAAGATGAGGAAATCAACATCAAACAGGGTTTCTTCTGCTGTGAATACTATCCTTCAGAAATTATGCACTGTTCTTGGATTGCTGAAGGATTTGTTGTTAATTGAGAGGTTATCAGATAGTTGCATTCTTCAACTTGTAAAAACAAGCATTACAACATTCATGGTTGAGAATATCCAGCTTTTGCAGCTGAAGGCAATTGGTTTACTTAGCGCGATATTCTATTTATACACACAACATCGCACATATGTGATAGATGAAGTGCTTCAGCTTCTTTGGAAATTACCATATTCAAAACGAGCTATAAGAGCCTACCACATACGCGAGGAAGAGCAAAGACAGATCCAGATGGTTACCGCTTTGCTGATTCAGTTAATTCACTGTAGTGCTAACCTTCCAGATGCTTTAAGACAAGCATCAAGTGGTAATGCTGTGTTGGAAGTCTCGGTTGACCCTAATGATCCAACTAAAGGCCATGAAGCCACAACAGAAGCTTGCTGTCTATTCTGGAGCCGTGTACTTCAGCGGTTTGCAAGTGTGAAGACCCAGGATGCTTCAGAGCTGAAATCCATAATGGAGAATCTTGTTACTGATTTACTCACAACTTTAAATTTGCCCGAGTATCCTGCTTCAGCTCCCATTTTGGAGGTTCTCTGTGTCCTACTACTTCAGAATGCTGGGCCGAAATCTAAGGATGTCTCTGCACGTTCCATGGCTATTGATATTCTTGGTACAATTGCTGCAAGGTTGAAGCGTGATGCTTTGGTTTGTAGCCAGGAGAAGTTCTGGATACTTCAGGATTTACATGGTCAGGATAGTGCTAATCAGCAATATCCAAAAGATTCTTGTTGTGTCTGTATGGATGGCAGTACCGACAATTTATTGATATGCCATGGCTGCCAGAGACCCTTCCACACTGACTGCCTGGGTATTAAAGAACATGAAGTTTCCAACTGGAACTGGTACTGTCAGACATGCATCTGTCATAAGCAACTGCTTGTATTACAGTCATATTGCAATTCCCGGTGTAAGGATGACGTGACAAAGAAACGTAATGCGTCAAAAGATTCTGAAATTTCAAAGCATGAAATTGTTCAACAGTTGCTCTTGAATTACCTTCAAGATGTCACTTCTGCTGATGATATCCATCTGTTCGTTTGCTGGTTTTATCTCTGCCTGTGGTACAAAGATGATCCTAATTGTCAGCGAAAGCCTATATACCACCTTGCTAGAATGAAATCAAGAATCATTGTACGGGACTCTAGTACCATCTCATCCACGTTGACGAGGGATTCAATTAAGAAGATTACTTTAATTTTGGGTCAAAACAGTTCATTTTGTCGAGGGTTTGATAAGATTCTTCACGTGCTTCTGGCAAGCCTAAGGGAGAACTCTCCAGTTATCAGGGCTAAGGCTTTACGAGCTGTTAGTATCATTGTAGAGGCTGATCCAGAGGTATTGGGTGATAAACGAGTACAGTCAGCTGTTGAAGGAAGGTTTTGTGACTCTGCAATTTCTGTTAGAGAAGCAGCATTGGAACTTGTCGGCAGGCACATTGCTTCACATCCAGATGTGGGTTTTAAGTATTTTGAAAAGATCGCTGAGAGAATCAAGGATACTGGAGTTAGTGTTCGAAAACGAGCAATAAAACTTATTCGAGACATGTGCAGTTCAAATGTCAACTTCTCTGGCTATACTAGGGCTTGCACAGAAATAATTTCACGCATTAGTGATGATGAGTCAAGTATCCAGGACCTTGTTTGCAAAACGTTTCATGAGTTCTGGTTTGAGGAGCCTTATGGTTCACAAACTCAGGTCTTTGGAGATGGTAGTACTGTTCCACTCGAGGTGGCTAAGAAAACAGAGCAAATTGTTGAAATGCTCAGGAGAATGCCCAACAATCAACTTCTTGTAACTGTAATAAAGCGCAACTTATCACTTGATTTTTTGCCCCAAGCTGCAAAAGCTGTTGGTGTCAACCCTGTGTCCCTTGCTACAGTGCGTAAGCGCTGTGAGTTAATGTGCAAATGCTTGCTGGAGAAGATATTGCAGGTTGAGGAAATTAATAGCAATGAAGTGGAGGTGCATGCTCTACCATATGTGCTGGCCTTGCATGCATTTTGTCTTGTGGACCCAACTCTCTGTGCACCTGCTTCAAACCCATCCCAGTTTGTTGTTACTTTGCAGCCATATCTTAAAACGCAGGTTGACAATCGCATGGTTGCACAGCTAGTTGAGAGTATAATCTTTGTAATTGATGCTGTGTTGCCCTTACTTCGGAAGTTACCTCCAAATATTGTTGAGGAGCTAGAGCAAGATTTGAAACATATGATTGTCCGGCATTCTTTCTTGACAGTAGTCCATGCTTGTATCAAGTGCCTCTGCTCTGTAAGCAACATAGGCAGTAAAGGGGCTGCTGTGGTGGAGCATCTTATTCAGGTCTTCTACAAATGTTTGGACAATAAGCAGCAAGTTGGGCGATCACTCTTTTGTCTTGGATCACTCATTCGATATGGCAATTCTTTGTTGGTAAGCTCAAGCAATAAAGTTATTGATGTCAGAAGGAGTCTTACCTTGTGTATAAAGTTTCTCTCTGAGGAGGATTTTGTTGTTAAGGCTAGATCATTGCAGGCACTAGGGTTTATTTTAATTGCCAGGCCTGAATACATGTTGGAAAAGGATATTGGAAAGATACTGGAGGGAACATTATCTTCAAATGCTGACATTCGTCTTAAGATTCAAGCATTGCAAAACATGTTGGAGTATCTCCTTGATGCTGAAAGCAAAATGGGAACAGATAAACCTGATGATAACGTAACTGGTTACACAGTTGGAGCTGTGCAGAGTGTACCCGTTGCTGCTGGAGCTGGGGACACAAACATATGCGGGGGTATAATTCAGTTATATTGGGATAATATTTTAGGCAGATGTTTGGATTCCAATGAACAAGTCCGCCAATCAGCTCTGAAGATAGTTGAAGTTGTGTTGCGCCAAGGTCTTGTTCACCCAATCACTTGTGTTCCATATCTAATAGCACTTGAAACTGATCCTCTGGAGTCAAATGCAAAGCTGGCTCATCATCTCCTAATGAATATGAATGAGAAGTACCCTGCATTTTTTGAAAGTCGTTTGGGTGATGGACTTCAAATGTCATTTATTTTCATGCAATCAATTAGCACTGCTTCTGAAAATGGCAATCAGAAAATCCCATCTAAAATCCCTGTATCTGGAAAAGGGAAACCCGAAACTGTCTCACTAGCTCAAGCAAGACTTGGTGTTTCTAGAATATACAAGCTCATCCGGGGGAACAGGAATTCAAGGAATAAATTTATGTCATCAATTGTGCGAAAATTTGACAATCCAAAGTGGAGCCATTCAGTAATAGCTTTCTTATCATACTGCACAGAGGTCCTTGGATTGCTGCCTTTCATTTCCCCTGATGAGCCCCTTTATCTAATATATGCCATCAATCGAATAGTTCAAATTAGGGCTGGGCCACTAGAAGCGAATTTTAAAGCCTGGAGTTCAAGGTTATCAAGAAATGAGAATCAAAGTACACCGAATGGGAATGGAATGTATCAACAGGAGACAGACAAGTCCACTATTATAACCCAAGGAACATCAATGGATTTGAATGGAACATTTCAGCAAAATCTAGATGCTCGTCCAGATTTGAATGACATGAGATCAGTGGATTTAAATGGAACATTCTACCAACAGCCAGATGATACTTTATCGAATAATGGCAGCTCCGAACCAAAGCCGCATGCTGTGGGTTCTGATTATTTTGCCTTCTCAAAAGATGATCTGGAGAGAGTTCAGGCAGACTGCTTATCAGCAATTGCACTGCAATTTCTCCTAAAATTGAAGAGACATCTGAAAATCATGTATAGTCTCAATGATGCTAGATGTCAGGCATATTCACCAACTGAACAGCCAAAACCTGGAGAAGTTATCTCCAGACAGAATATCCCATTCAATATTAGTGAAACTCAGTTCAGCGTGCCTTCAAATCCACAAGAATTAATACAGAGATACCAGGAATTTAAGTATGCATTGAGGGAAGATACGGTGGATTATTCACTGTACACTGCAAATATAAAACGGAAGCGACCTACACCCAGAAAAGTTCGGAGATCTGCACCCATGGCTAGTGGGGACTTAGAGGATGATGATGATGATGATGATGATTGGGGTGGTGGAATGCGCAAGATAACAAGTAGTGGTGGCCGTAGAGCTAACCTTAGAAGCAGCAGTAGGCAATATTGA 5415 0.4231 MSFPDTSGAATAVVAVASSGRRGIGLSNTIHSEVAPCLPLPSLPVFCGSSDRDLRLVDSPAMLNRVDVLAQAGKIAELLQHTDVSYLNLRDDNGSGSYMYIEPLELHDEVLRCNPEAFEYSTTGPVKEQISGRAVGEKKLRESSLPGINQTKEDYNATPNRQHDHFSSNDISTLSSKKSKVRKKGGDGISVGPSSAELQDATIGRFCEFLEDLCSKAEVQTDDRDEAEWLPLSLSDLRLLVNEIMSIHEKKLMHIVPVEVLVRILNVLDHQIHRAEGLSIEDCDNSDSELISSILIALESIHAALAVMAHTEMPKQIYKEEIIERILEFSRRQIMDVMCASDPSYRALHRPSENTACEVDDYYEENDAEFGSASKKRRTSKSTKMRKSTSNRVSSAVNTILQKLCTVLGLLKDLLLIERLSDSCILQLVKTSITTFMVENIQLLQLKAIGLLSAIFYLYTQHRTYVIDEVLQLLWKLPYSKRAIRAYHIREEEQRQIQMVTALLIQLIHCSANLPDALRQASSGNAVLEVSVDPNDPTKGHEATTEACCLFWSRVLQRFASVKTQDASELKSIMENLVTDLLTTLNLPEYPASAPILEVLCVLLLQNAGPKSKDVSARSMAIDILGTIAARLKRDALVCSQEKFWILQDLHGQDSANQQYPKDSCCVCMDGSTDNLLICHGCQRPFHTDCLGIKEHEVSNWNWYCQTCICHKQLLVLQSYCNSRCKDDVTKKRNASKDSEISKHEIVQQLLLNYLQDVTSADDIHLFVCWFYLCLWYKDDPNCQRKPIYHLARMKSRIIVRDSSTISSTLTRDSIKKITLILGQNSSFCRGFDKILHVLLASLRENSPVIRAKALRAVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIASHPDVGFKYFEKIAERIKDTGVSVRKRAIKLIRDMCSSNVNFSGYTRACTEIISRISDDESSIQDLVCKTFHEFWFEEPYGSQTQVFGDGSTVPLEVAKKTEQIVEMLRRMPNNQLLVTVIKRNLSLDFLPQAAKAVGVNPVSLATVRKRCELMCKCLLEKILQVEEINSNEVEVHALPYVLALHAFCLVDPTLCAPASNPSQFVVTLQPYLKTQVDNRMVAQLVESIIFVIDAVLPLLRKLPPNIVEELEQDLKHMIVRHSFLTVVHACIKCLCSVSNIGSKGAAVVEHLIQVFYKCLDNKQQVGRSLFCLGSLIRYGNSLLVSSSNKVIDVRRSLTLCIKFLSEEDFVVKARSLQALGFILIARPEYMLEKDIGKILEGTLSSNADIRLKIQALQNMLEYLLDAESKMGTDKPDDNVTGYTVGAVQSVPVAAGAGDTNICGGIIQLYWDNILGRCLDSNEQVRQSALKIVEVVLRQGLVHPITCVPYLIALETDPLESNAKLAHHLLMNMNEKYPAFFESRLGDGLQMSFIFMQSISTASENGNQKIPSKIPVSGKGKPETVSLAQARLGVSRIYKLIRGNRNSRNKFMSSIVRKFDNPKWSHSVIAFLSYCTEVLGLLPFISPDEPLYLIYAINRIVQIRAGPLEANFKAWSSRLSRNENQSTPNGNGMYQQETDKSTIITQGTSMDLNGTFQQNLDARPDLNDMRSVDLNGTFYQQPDDTLSNNGSSEPKPHAVGSDYFAFSKDDLERVQADCLSAIALQFLLKLKRHLKIMYSLNDARCQAYSPTEQPKPGEVISRQNIPFNISETQFSVPSNPQELIQRYQEFKYALREDTVDYSLYTANIKRKRPTPRKVRRSAPMASGDLEDDDDDDDDWGGGMRKITSSGGRRANLRSSSRQY* 1805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2144 1804 Gene3D - 798 976 IPR011989 -
Ahy10g2144 1804 SUPERFAMILY ARM repeat 831 1538 IPR016024 -
Ahy10g2144 1804 MobiDBLite consensus disorder prediction 144 175 - -
Ahy10g2144 1804 ProSiteProfiles Zinc finger PHD-type profile. 662 711 IPR019787 -
Ahy10g2144 1804 PANTHER NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED 22 1792 IPR033031 GO:0003682|GO:0010468|GO:0061780
Ahy10g2144 1804 ProSitePatterns Zinc finger PHD-type signature. 665 708 IPR019786 -
Ahy10g2144 1804 Pfam Sister chromatid cohesion C-terminus 1344 1541 IPR024986 -
Ahy10g2144 1804 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 648 716 IPR013083 -
Ahy10g2144 1804 MobiDBLite consensus disorder prediction 1753 1804 - -
Ahy10g2144 1804 SMART PHD_3 664 709 IPR001965 -
Ahy10g2144 1804 MobiDBLite consensus disorder prediction 129 194 - -
Ahy10g2144 1804 Gene3D - 1046 1420 IPR011989 -
Ahy10g2144 1804 PANTHER EXPRESSED PROTEIN-RELATED 22 1792 - -
Ahy10g2144 1804 Pfam HEAT repeat associated with sister chromatid cohesion 856 897 IPR026003 -
Ahy10g2144 1804 SUPERFAMILY FYVE/PHD zinc finger 663 716 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2144 Ahy-Chr10 109763816 109778851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2144 663 708 PHD Transcription Factor Family AT5G12400 44.681 1.96e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2144 K06672 - gmx:100792021 2803.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2635 20 135670074 135684968 Ahy10g2144 10 109763816 109778851 hybridization