Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2127 ATGATGGACAAGGAAAGTGAAGAATTGGCATTAACCCCAGAAGTGACTAAGCCGGATACGGTTGAAACAAGAAGGTTCTCTTCTGGCAAAGGATCTTCTGGAAATAACACTGCAAAAGTTGTTCCTCGTTATCTCCGAGCTTCAACTGGTTCTTGTCATGATTTTTGTAAATATGGGAGGAGGCATGAACTTGAAGGGATCGAAAGGCGTTCTATACCTGATAGAGCTACACGAAAACAACTTTACCAGAGTTCTCAAAAGAGTATTGGGGGGATAATGACATCGGTTGCCAAACTCAGAGGGTCGCTTGATTCAAGGTTGCCTTTTGTCAAACTACAAGAATCAATTGATTCCGAGCATGACATTTCTGATACTGCTGGCACCAATAAGCATGGACTGTCAACAAAATCATTCGACAAGGAAAAGCAAATAGGGAATGATGCTCGGGAAAACTGGAAGAAAACATCGTTGGTCAAGTTCAAACCTTCCCTCCTGAAATCCCATACATCTCCCTCGGCAATACAGGAAATTTCAACGACTGCAAAGGAGGTGAAATCTTCATTGAAATCAACTTCTCTCAAGTTGGAAACTTCACCAAAATCAGCTTCTAAGAAGGTGGAAGCTCCATCAAATTTAAGTTCCAAGAAGGTGAAGGCTCAATCAAAGTCAATTTCCAACAATGGGGAAACACCATCAAGATCAAATTCCAAGGTCAAAACTTCATCAAGATCAACTTCCAACCTGGTGGGAACTTCGTCGGAGGCATCTTCTTTAAAGGGTAATAAGGACATGAAGTTGTCTGAAAAACGGGTAACTTCTTTGAGCCTAGACTCTGCCACAAGGAACACAATTTCAACTATGAAATCCTCAAAAAGCTTTGGTAGCAAAATGAATAGTGAGATCAAGATGGAAAAGGATGCAGCCTCTTCCAAAACAGCTTCAAGAAAATTGATAGCACCAATAAGGACCCCAGTGTCCCCAAGACCTTCTCTTGTAAGAGTTGCAAGTTTAAATTCAAGAAAGAATAAGAGCCTGAAAATCGTGTCTCGTCTTAAGAATCAGCAGAATGCCAGAAAAGTTGCACCTGAGGAATCCAACAATAATGACAATCAGGTCGAGGAAAAAACTCTGTACGTTATCAAGATGGAAAGTGGGAACAAAACTTTGGAATCTGATCAAAATCCAAGCTATGACAATGAACCATCCCTTCCGCAGATGTCACCGCCAAACCCTTCACCGCCTTCAACTTCTGAATCTGTATCCCAAGAAGATCAAGAGGAATCTGACTATACAACTAGTGAATTCGAGATGGATTCTTTCTCAAGTAACCATGAGCTTGAAAACATGGAAAATAGGGAGACTTTGGAAGTTGAGGAGAAGGGAAAGCCGACAAAGGGTGGGATTGTGTGCTCCGATGATGTGGCCCAAGTGCTGAAATTGAAGTTCAGAAGGGGAAAAGTTGTCGATAATCAACTTGAGAGAAACACTCCAAGGAGGCTAAAATTTCGGAGAGCAAAACTGTTGGGGGAGAAAGCAAATCTTAAGGGTGGAAGGAAAAGCCTTAAAGGACTAGATGAAGGTTTTGCTGATGGAGCCGATGCTACAACTGGTCCAGAGAAGGTTGTCTTGAGACATCAAGATATGCAGGACAAGAAAGATGCTCAGGGATTGTTCAATAACGTGATCGAGGAAACGGCGAGTAAACTAGTCGAAGCACGGAAGAGCAAGGTTAAAGCATTGGTTGGTGCTTTTGAAACTGTAATCTCCCTCCAAGAGAAGAAACCTCCTGCTAACACTGTCAGTTGA 1806 0.4214 MMDKESEELALTPEVTKPDTVETRRFSSGKGSSGNNTAKVVPRYLRASTGSCHDFCKYGRRHELEGIERRSIPDRATRKQLYQSSQKSIGGIMTSVAKLRGSLDSRLPFVKLQESIDSEHDISDTAGTNKHGLSTKSFDKEKQIGNDARENWKKTSLVKFKPSLLKSHTSPSAIQEISTTAKEVKSSLKSTSLKLETSPKSASKKVEAPSNLSSKKVKAQSKSISNNGETPSRSNSKVKTSSRSTSNLVGTSSEASSLKGNKDMKLSEKRVTSLSLDSATRNTISTMKSSKSFGSKMNSEIKMEKDAASSKTASRKLIAPIRTPVSPRPSLVRVASLNSRKNKSLKIVSRLKNQQNARKVAPEESNNNDNQVEEKTLYVIKMESGNKTLESDQNPSYDNEPSLPQMSPPNPSPPSTSESVSQEDQEESDYTTSEFEMDSFSSNHELENMENRETLEVEEKGKPTKGGIVCSDDVAQVLKLKFRRGKVVDNQLERNTPRRLKFRRAKLLGEKANLKGGRKSLKGLDEGFADGADATTGPEKVVLRHQDMQDKKDAQGLFNNVIEETASKLVEARKSKVKALVGAFETVISLQEKKPPANTVS* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2127 601 MobiDBLite consensus disorder prediction 345 373 - -
Ahy10g2127 601 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 481 598 - -
Ahy10g2127 601 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 2 477 - -
Ahy10g2127 601 MobiDBLite consensus disorder prediction 185 260 - -
Ahy10g2127 601 MobiDBLite consensus disorder prediction 387 401 - -
Ahy10g2127 601 MobiDBLite consensus disorder prediction 1 37 - -
Ahy10g2127 601 MobiDBLite consensus disorder prediction 121 150 - -
Ahy10g2127 601 SMART CaM_binding_2 476 589 IPR012417 GO:0005516
Ahy10g2127 601 PANTHER EMB|CAB62594.1 2 477 - -
Ahy10g2127 601 MobiDBLite consensus disorder prediction 185 274 - -
Ahy10g2127 601 MobiDBLite consensus disorder prediction 1 24 - -
Ahy10g2127 601 MobiDBLite consensus disorder prediction 387 449 - -
Ahy10g2127 601 MobiDBLite consensus disorder prediction 134 150 - -
Ahy10g2127 601 Pfam Plant calmodulin-binding domain 479 589 IPR012417 GO:0005516
Ahy10g2127 601 PANTHER EMB|CAB62594.1 481 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2127 Ahy-Chr10 109552396 109556027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2127 539 587 Calmodulin-binding Proteins AT2G38800 46.000 9.48e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2127 - - adu:107471215 1100.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2618 20 135413004 135416530 Ahy10g2127 10 109552396 109556027 hybridization
Ahy10g2127 10 109552396 109556027 Ahy14g2934 14 138096905 138100163 PCT
Ahy10g2127 10 109552396 109556027 Ahy4g2592 4 123861657 123864793 PCT
Ahy14g2934 14 138096905 138100163 Ahy10g2127 10 109552396 109556027 PCT
Ahy4g2592 4 123861657 123864793 Ahy10g2127 10 109552396 109556027 PCT