Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2083 ATGGCATATTTTAGTGTTGTGTCAAATCATGGTAGTTATAGAGCAACTTCCCATGAATTCAAATTGGTTTTCCTTCACCGAACCACTGTTGTAGCTGTTGATGAAGATGTTATCCCTAAGACTTGTTTCAACATGTTTCCTTTTTCTGAGCTGCTGAACATGACCCAAGATTATGATTTTTTAGTTGATGTCATTGGACTTTTAACTTCAGTTGGAGAAGAGAAAGAATATGCAAGAGAGGGAAAAATTGTGAAAATGATTGCATTGGAATTAACTTCAAAAGATCTTACAGTGCGATGTGCATTGTTTGGGGATTATGTTAATCAAGTAAATCATTTCCTTGCCTCTGGGTACGTGGAGCAGTCTGTTGTAGTTATTCAACTTGCAAAAGTCAAGTTCTTTCGGGGTCAAGTAGGTCTTCAAAATGTGATGTATGCCACTCAAATGTTATTTAATCTTGATATTCCTGAAGTTGTTGAATTCAGGCAGAGTATGATTGAGCAAGGTGTCAGTGGTACCCAGCCACTGTTTATTGCAAATGAGGGTAAAGTTCTCTCCTTGGAAGATGATTTCATGCGTCTAACTAGAAAATGCACTATTGAAGAGCTTCAAGATAACAATCAGGAGGGTTCTTTTATCATTTTTGGAGCAATCCAAGGTATTGTTGAGGATGGAGGTTGGTGGTATTCTGCTTGTGTGTGTGGAAAGGGTATCTATCCTCAAAATGGTGCCTATTACTGTGATTTTTGTTTGAAGCACATAACTAATGTCACTCCAAGATTTAAAATTAAAGTGACAGTTGAAGATCATACTGGGGAGGGTATTTTCCTTCTCTTTGATCGTGAGGCTTCCTATTTGCTTAAGAAATCATGTGCTGATTTGTTTACTGAAGTTCAAAGAGATGCAAGTGTTATATGTGGGGATACTTATCCTCCCATATTCCAAGGGCTCATTGGAAAGAAGTTGCTGCTCAAGGTTGATACCAAAGGTGTCCCACATGATACATTTTATGGGACTTTCCAAGTTACGAGAATTTGTGATGATTCCACCATCATTGCGATGTTTGAACTTCCCAATTATGATGCTGATGATGAGTCTTCTCCAAAAAAGGAGCATGATTTACACAAATCTGTTCCTGCTGGAAAAGCTGATGTTGGTATTAAGAAGGAGTCTTCTGATAGTTTTATCAAAACTGAGAAAGATGCTGGTGATTGTGCTGGGATTTTGTGTAAATCCCCAGTTCTTATAGATTTTTTGGCTGAAAAACAGCCTGTTATTTCTGTGGGGACTGAATTTGTTGGCTTAATTGATGGTGAGCATGGAAAGGAAGAGAAAACTCCCAGCAATGATACTCTTAGTGATGATCTTTCTATTGAAATCGATATATTGCTTAGCTCAACGGAAAAAGAAACTCAGGAGTTGTTGTCCCATGTTCTTGAAGCACCTTCCCAAAATGGAGAGAAGCTTACCCATGAAAATCATGTTGTGACCTCCAAGAGTAAGAGAAATTTGAATCCTCAGTTTGAAGAGGTTGCTGTTGATGCAGATGGGCGTGGGTTCAAGGTTGCTAAGGTTAATGGAGTTTGA 1587 0.3844 MAYFSVVSNHGSYRATSHEFKLVFLHRTTVVAVDEDVIPKTCFNMFPFSELLNMTQDYDFLVDVIGLLTSVGEEKEYAREGKIVKMIALELTSKDLTVRCALFGDYVNQVNHFLASGYVEQSVVVIQLAKVKFFRGQVGLQNVMYATQMLFNLDIPEVVEFRQSMIEQGVSGTQPLFIANEGKVLSLEDDFMRLTRKCTIEELQDNNQEGSFIIFGAIQGIVEDGGWWYSACVCGKGIYPQNGAYYCDFCLKHITNVTPRFKIKVTVEDHTGEGIFLLFDREASYLLKKSCADLFTEVQRDASVICGDTYPPIFQGLIGKKLLLKVDTKGVPHDTFYGTFQVTRICDDSTIIAMFELPNYDADDESSPKKEHDLHKSVPAGKADVGIKKESSDSFIKTEKDAGDCAGILCKSPVLIDFLAEKQPVISVGTEFVGLIDGEHGKEEKTPSNDTLSDDLSIEIDILLSSTEKETQELLSHVLEAPSQNGEKLTHENHVVTSKSKRNLNPQFEEVAVDADGRGFKVAKVNGV* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2083 528 SUPERFAMILY Nucleic acid-binding proteins 197 329 IPR012340 -
Ahy10g2083 528 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 8 295 - -
Ahy10g2083 528 Gene3D - 37 173 IPR012340 -
Ahy10g2083 528 Gene3D - 189 350 IPR012340 -
Ahy10g2083 528 MobiDBLite consensus disorder prediction 363 384 - -
Ahy10g2083 528 CDD RPA1_DBD_B_like 63 166 - -
Ahy10g2083 528 PANTHER REPLICATION FACTOR A 1, RFA1 8 295 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy10g2083 528 Pfam Domain of unknown function DUF223 3 57 IPR003871 -
Ahy10g2083 528 Pfam Replication factor-A C terminal domain 216 300 IPR013955 -
Ahy10g2083 528 CDD RPA1_DBD_C 200 345 IPR013955 -
Ahy10g2083 528 SUPERFAMILY Nucleic acid-binding proteins 43 165 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2083 Ahy-Chr10 108950949 108958751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2083 9 294 Core DNA Replication Machinery Family AT5G08020 25.723 5.49e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2083 - - adu:107471135 1059.67