Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2082 ATGGAGGGATCCATAGGCCTAAGAAAAGGTGCATGGGCTAAGGTGGAAGATGACCTTCTAAGAGCTTGTGTTGAACAATATGGAGAAGGAAAGTGGCACCTAGTTCCTTCTAGAGCGGGGTTGAACAGATGCCGCAAAAGTTGTAGACTGAGATGGTTGAATTATCTGAAACCAAATATAAAGCGTGGAGAGTTCTCTGAAGATGAAGTTGATCTCATGATTAGAATGCACAGACTTTTGGGAAACAGATGGTCCTTAATTGCTGGAAGACTTCCGGGAAGAACGCCAAACGATGTGAAGAATTACTGGAACACCTATGTTCGAAGGAATAATAAGCACACTTCATCATCATCATCAGTACCCTCTCCTTCATCAGTGGTGACGACAGTGAAACGTCATGACCATATTAATCATCAGAGGGATGGGGCCAAGGCAGAAGAAGAGTGCACCGATAATAATAATAATAATAATGATAATAATGGTTCTGGTGGTGGATGTGATGATGGGAACACGTGTCGGAACAAGAACGGTGGCAAAGGGGATGAAGAGAAGTTGAACGACGGGTGCTTACTCTCAGTCTCAGGTGCTGAGGAAGAAGAAGAAGAAGAAGACTGGAAGCTGCTTTTACCTGACTTCAATTGGGATGCTCATAATGATGATCACTTCTTGAAGGACGCTTCTGATGCTGACCACGATATGCTTATTAATGTCCATGGTCAAACTTGGAGTGATATCCTTCTTGATATCAATTTGTGGGATCCACAATAA 768 0.4297 MEGSIGLRKGAWAKVEDDLLRACVEQYGEGKWHLVPSRAGLNRCRKSCRLRWLNYLKPNIKRGEFSEDEVDLMIRMHRLLGNRWSLIAGRLPGRTPNDVKNYWNTYVRRNNKHTSSSSSVPSPSSVVTTVKRHDHINHQRDGAKAEEECTDNNNNNNDNNGSGGGCDDGNTCRNKNGGKGDEEKLNDGCLLSVSGAEEEEEEEDWKLLLPDFNWDAHNDDHFLKDASDADHDMLINVHGQTWSDILLDINLWDPQ* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2082 255 MobiDBLite consensus disorder prediction 110 169 - -
Ahy10g2082 255 Gene3D - 63 160 - -
Ahy10g2082 255 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Ahy10g2082 255 PANTHER TRANSCRIPTION FACTOR MYB113-RELATED 6 158 - -
Ahy10g2082 255 CDD SANT 64 107 IPR001005 -
Ahy10g2082 255 MobiDBLite consensus disorder prediction 110 130 - -
Ahy10g2082 255 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 158 - -
Ahy10g2082 255 CDD SANT 11 56 IPR001005 -
Ahy10g2082 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 111 IPR017930 -
Ahy10g2082 255 MobiDBLite consensus disorder prediction 149 169 - -
Ahy10g2082 255 SMART sant 61 109 IPR001005 -
Ahy10g2082 255 SMART sant 8 58 IPR001005 -
Ahy10g2082 255 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Ahy10g2082 255 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Ahy10g2082 255 SUPERFAMILY Homeodomain-like 6 103 IPR009057 -
Ahy10g2082 255 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Ahy10g2082 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 60 IPR017930 -
Ahy10g2082 255 MobiDBLite consensus disorder prediction 131 148 - -
Ahy10g2082 255 Gene3D - 9 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2082 Ahy-Chr10 108903475 108908381 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2082 2 109 MYB Transcription Factor Family AT1G66370 73.148 5.92e-55 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy10g2082 Myb_DNA-binding 1.10E-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2082 - K09422 adu:107471154 483.411