Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2077 ATGAATACAAAGATTGAACTGCCACCAGGTTTCAGGTTTCATCCAACAGATGAAGAGCTCATAACTCACTACCTCTCTCAGAAGGTTGTTGCTAGCTGCTTCTATGCAACTGCCATTATTGGAGAGGCTGATTTCAACAAGTGTGAGCCTTGGGATTTACCTTGGAGGGGCAAAATGGGAGAAAAAGAATGGTATTTTTTCTGTTTGAAGGACAAAAAATACCCAACAGGTGAAAGGACAAATAGAGCCACTGGTGCTGGGTACTGGAAGGCCACAGGAAAAGACAGAGAGATATACAATGCAAAAGCAAAAGCACTTATTGGGATGAAGAAAACACTTGTTTTCTACAAAGGAAGAGCTCCAAATGGTGAAAAGACAAATTGGGTCATGCATGAATATAGGTTGGAAGGCGATAATAAACCTTCTATATACAATCTTCCCAAAACAACCAAGAAAGAGTGGGCTTTGTGCAGAGTTCTACACAAAAGTGAAAAGAAAGTAATGCATGTTCCACAACCACAGGGATTGGTTGAGTTCAGCTCTTATGAAAATAAGGAACTTCCCCAATTGATGGATTCTTCACAAGTAACATTCTTTTCATCAGACCCAAATAATCAAAGTGAGGATCCAAATCCAATCACACGTGATGATGATAATAATAATAATGATGACATCATAGTTGATAGCATTGAAACTCCTTTCTTGGAACAACAACCACCTTATTATTCTTCATCCTATGATTCTTCAGATTTAGACACCCTTAACCCTGCCACATGGGATATTTCCGAAAATGCCCCTACAAGTAATGCGTCTAAGGAGACGGACTTTGATGCTGACATGTTCTCTTTGATGTACAACAATAGAGAAGTGTTCCAAACATCATTTGAGAATCAGGAATATTATGCATATGATTCTATGGGACATGTGGACAATGGTTCCCTATGGAATTTTTAG 954 0.3889 MNTKIELPPGFRFHPTDEELITHYLSQKVVASCFYATAIIGEADFNKCEPWDLPWRGKMGEKEWYFFCLKDKKYPTGERTNRATGAGYWKATGKDREIYNAKAKALIGMKKTLVFYKGRAPNGEKTNWVMHEYRLEGDNKPSIYNLPKTTKKEWALCRVLHKSEKKVMHVPQPQGLVEFSSYENKELPQLMDSSQVTFFSSDPNNQSEDPNPITRDDDNNNNDDIIVDSIETPFLEQQPPYYSSSYDSSDLDTLNPATWDISENAPTSNASKETDFDADMFSLMYNNREVFQTSFENQEYYAYDSMGHVDNGSLWNF* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2077 317 MobiDBLite consensus disorder prediction 196 225 - -
Ahy10g2077 317 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 201 - -
Ahy10g2077 317 PANTHER NAC DOMAIN-CONTAINING PROTEIN 92-LIKE 3 201 - -
Ahy10g2077 317 MobiDBLite consensus disorder prediction 196 210 - -
Ahy10g2077 317 ProSiteProfiles NAC domain profile. 7 162 IPR003441 GO:0003677|GO:0006355
Ahy10g2077 317 SUPERFAMILY NAC domain 5 162 IPR036093 GO:0003677|GO:0006355
Ahy10g2077 317 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Ahy10g2077 317 Gene3D NAC domain 16 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2077 Ahy-Chr10 108765146 108768176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2077 5 201 NAC Transcription Factor Family AT5G39610 65.482 7.26e-85 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy10g2077 NAM 8.90E-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2077 - - ahf:112784292 551.206