Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2064 ATGCATGGTCCCAAAATGTGTCAGGTCTTGATGTTGACTGACCTCTCTATTTATTCAGTCTACAACTCGCCCCTCAATTTCCTCAAACCCAACTTCTTCTTTCATCAATCTAACTTAACTCCCTGCTTCTTAAGGAAATTGATGGCTCTTCTTGGGTTCCTTCTTCTGGTGTTTATCTCCATGCTCTCATATGTTAGTGCCTATGGATATGGTGGTTGGATCAATGCACATGCCACATTCTATGGTGGTAGTGATGCTTCTGGAACAATGGGTGGAGCTTGTGGATATGGAAACTTGTACAGCCAAGGGTATGGGACAAACACAGCAGCACTAAGCACAGCATTGTTCAACAATGGATTAAGCTGTGGAGCATGTTATGAAATAAGGTGTGCAAATGACCCACAGTGGTGTTCTCCTGCCTCAATTGTAGTAACCGCCACTAACTTCTGCCCCCCTGGTGGTTGGTGTGACCCTCCAAATCACCATTTTGATCTCTCTCAGCCTGTTTTTCAGCAAATTGCTCAGTATAAAGCTGGCGTTGTTCCTGTCATTTACAGAAGGGTGAGGTGCAAGAGAAGAGGGGGAATAAGGTTCACCATAAATGGCCACCCATACTTCAATTTAGTCCTAGTAACAAATGTTGGAGGTGCTGGTGATGTGCATGGTGTAGCCATCAAAGGTTCAAGAACTAGATGGCAAGCAATGTCAAGAAACTGGGGGCAAAATTGGCAAAGCAACTCTTACTTGAATGGACAAAGCCTTTCATTTGTAGTTACCACAAGTAATGGCCACAGTGTGGTATCTTACAATGTTGCCCCTCCAAGTTGGTCCTTTGGACAGACCTACACTGGAAGACAATTCCCTTAA 867 0.4429 MHGPKMCQVLMLTDLSIYSVYNSPLNFLKPNFFFHQSNLTPCFLRKLMALLGFLLLVFISMLSYVSAYGYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCSPASIVVTATNFCPPGGWCDPPNHHFDLSQPVFQQIAQYKAGVVPVIYRRVRCKRRGGIRFTINGHPYFNLVLVTNVGGAGDVHGVAIKGSRTRWQAMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPSWSFGQTYTGRQFP* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2064 288 PANTHER EXPANSIN-A15 46 287 IPR002963 GO:0009664
Ahy10g2064 288 PRINTS Expansin signature 103 117 IPR002963 GO:0009664
Ahy10g2064 288 PRINTS Expansin signature 170 183 IPR002963 GO:0009664
Ahy10g2064 288 PRINTS Expansin signature 130 141 IPR002963 GO:0009664
Ahy10g2064 288 PRINTS Expansin signature 270 286 IPR002963 GO:0009664
Ahy10g2064 288 PRINTS Expansin signature 142 152 IPR002963 GO:0009664
Ahy10g2064 288 PRINTS Expansin signature 241 262 IPR002963 GO:0009664
Ahy10g2064 288 PRINTS Expansin signature 206 227 IPR002963 GO:0009664
Ahy10g2064 288 PRINTS Expansin signature 194 206 IPR002963 GO:0009664
Ahy10g2064 288 PRINTS Expansin signature 153 170 IPR002963 GO:0009664
Ahy10g2064 288 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 205 284 IPR007117 -
Ahy10g2064 288 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 91 195 IPR007112 -
Ahy10g2064 288 PANTHER EXPANSIN 46 287 - -
Ahy10g2064 288 SUPERFAMILY PHL pollen allergen 192 284 IPR036749 -
Ahy10g2064 288 Pfam Lytic transglycolase 108 185 IPR009009 -
Ahy10g2064 288 Pfam Expansin C-terminal domain 196 273 IPR007117 -
Ahy10g2064 288 PRINTS Expansin/Lol pI family signature 72 87 IPR007118 GO:0005576
Ahy10g2064 288 PRINTS Expansin/Lol pI family signature 270 284 IPR007118 GO:0005576
Ahy10g2064 288 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Ahy10g2064 288 PRINTS Expansin/Lol pI family signature 90 108 IPR007118 GO:0005576
Ahy10g2064 288 PRINTS Expansin/Lol pI family signature 112 130 IPR007118 GO:0005576
Ahy10g2064 288 PRINTS Expansin/Lol pI family signature 178 194 IPR007118 GO:0005576
Ahy10g2064 288 SUPERFAMILY Barwin-like endoglucanases 72 213 IPR036908 -
Ahy10g2064 288 SMART dpbb_1 108 185 IPR007112 -
Ahy10g2064 288 Gene3D - 59 191 IPR036908 -
Ahy10g2064 288 Gene3D - 195 287 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2064 Ahy-Chr10 108612815 108615439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2064 48 287 Expansin Gene Family AT2G03090 77.419 1.96e-139 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2064 K20628 - gmx:100790170 452.21