Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2051 ATGGAGGAAAGGAATATTGAGATGGAGAATAAGATTGAAGATGAGATGATGCCAGGTTTCAGATTTCACCCAACAGATGAAGAGATTGTTGGTTTTTATCTAAAAAGAAAAATTCAGCAAAAATCTCTTCCTATTGAATTGATCAAGCAAGTTGATATCTATAAGTATGAGCCATGGGACCTTCCAAGGGTGGCAAGTAATGGAGAGAAAGAATGGTATTTCTACTGTCCAAGAGACAGGAAATACAGAAACAGTGCAAGGCCCAACAGAGTGACAAGATGTGGGTTTTGGAAGGCCACTGGAACTGACAGGCCCATATACTCATCTGAGGCCCAATCCATTATTGGTTTGAAGAAATCACTTGTTTTCTACAGAGGCAGAGCTGCTAAGGGTTTCAAAACTGATTGGATGATGCATGAGTTTAGGCTCCCTTCACTTTCTTCTGATTCAGCCAAGAAATGCTCTGACAAAACTACCCCTGCTTCTGATTCATGGGCAATATGTAGGATATTCAAGAAAACAAACACAATGTCCATGGCGCAAAAAGCCTCATTACCTCATCATCCTTATAATTGGAATCATCATAATCAATTATTTGATGATATACTCACACATCAACAACACCAACACCAACACCCTATTATTCCAAACTCCAACAACAACTTCATCTTCTACAATTCCAATTCTACCCTTGAACCCACAAAAGAAATTGATGCCACTACTACTAGTAGCTCCATTGTTATTTCTTCCAACATAGGCCTTCATGAAGATCCAAATCATCATCATTACAATAATAATAGTAGTGGGTTCTCATATGATGATGATTCAGGTGTAATTACAACAATTGCTGGGTTCCCATTCAATTTGCCTCCAAATGATGATGATGCTGCTGCTTGGAATAATAATAATAATAAGCCTAATACTACTCTGCCATGGGATTACTCATCAGACATGTCCACTACCTATTCCACTAATAAATCTTACACTTAA 990 0.3808 MEERNIEMENKIEDEMMPGFRFHPTDEEIVGFYLKRKIQQKSLPIELIKQVDIYKYEPWDLPRVASNGEKEWYFYCPRDRKYRNSARPNRVTRCGFWKATGTDRPIYSSEAQSIIGLKKSLVFYRGRAAKGFKTDWMMHEFRLPSLSSDSAKKCSDKTTPASDSWAICRIFKKTNTMSMAQKASLPHHPYNWNHHNQLFDDILTHQQHQHQHPIIPNSNNNFIFYNSNSTLEPTKEIDATTTSSSIVISSNIGLHEDPNHHHYNNNSSGFSYDDDSGVITTIAGFPFNLPPNDDDAAAWNNNNNKPNTTLPWDYSSDMSTTYSTNKSYT* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2051 329 PANTHER NAC DOMAIN-CONTAINING PROTEIN 94-RELATED 1 212 - -
Ahy10g2051 329 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 212 - -
Ahy10g2051 329 SUPERFAMILY NAC domain 12 173 IPR036093 GO:0003677|GO:0006355
Ahy10g2051 329 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Ahy10g2051 329 Gene3D NAC domain 25 178 IPR036093 GO:0003677|GO:0006355
Ahy10g2051 329 ProSiteProfiles NAC domain profile. 16 173 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2051 Ahy-Chr10 108271553 108274308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2051 2 178 NAC Transcription Factor Family AT5G39820 67.016 2.21e-89 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy10g2051 NAM 3.90E-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2051 - - aip:107621433 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2538 20 133573749 133576768 Ahy10g2051 10 108271553 108274308 hybridization