Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2047 ATGGCTGAAGGTGTTAGTGAAGCAAACAATACTAAAGCGTCGCCATCGCCATTGCCACCAGAAGCAGAGAAGAAGAAAGAACAAAGCCTACCATTTTTCAAGCTCTTCTCATTTGCAGACAAGTATGACTACATGCTCATGATCTCTGGAACCATCGGCGCCATTGTTCATGGCTCCTCCATGCCCGTTTTCTTCCTCCTCTTCGGTCAAATGGTCAACGGTTTTGGTAAGAACCAAATGGACCTTAACAAGATGACTCAGGAAGTCTCAAAGTATGCTCTTTACTTTGTGTACCTTGGCCTTGTGGTTTGCATATCATCATATGCAGAAATTTCATGCTGGATGTATAGTGGGGAGAGGCAAGTGAGTACACTAAGGAAGAAGTATTTGGAAGCAGTGCTTAAACAAGACGTAGGTTTCTTTGATACAGATGCAAGAACAGGGGATATTGTTTTCAGTGTCTCAACGGACACACTTCTTGTTCAAGATGCCATCAGTGAGAAGGTTGGGAACTTCATACATTATCTTTCAACTTTTCTGGCTGGACTTGTGGTTGGTTTTGTGTCCGCATGGAGGCTAGCACTTCTAAGTGTTGCCGTGATTCCCGGCATCGCTTTCGCCGGCGGCTTGTATGCTTACACTCTTACCGGCCTTACATCCAAGAGTCGCGAATCCTATGCCAATGCAGGCATCATTGCCGAACAGGCCATTGCGCAAGTTCGAACCGTTTACTCTTACGTTGGGGAGAGCAAGGCGCTGAACTCTTATTCAGATGCAATACAGAACACTCTGAAGCTTGGATATAAAGCAGGAATGGCGAAAGGATTAGGCCTCGGATGCACCTATGGAATAGCTTGCATGTCATGGGCACTAGTCTTTTGGTACGCCGGCGTTTTCATCCGAAATGGACAGACCGACGGAGGCAAGGCGTTCACGGCTATATTCTCGGCCATTGTTGGTGGAATGAGTTTGGGACAGTCTTTTTCGAATTTAGGCGCCTTTAGTAAAGGCAAAGCGGCCGGATACAAGTTAATGGAGATCATCAAGCAGAAACCAACAATTGTGGAGGATCCTTTGGAAGGCAAGTGCTTGGGAGAGGTTAATGGAAACATTGAATTCAAGGATGTTGGTTTTAGCTATCCCTCGCGGCCGGATGTCATGATCTTTCGCAATTTCTCAATCTTTTTCCCGGCCGGGAAAACAGTGGCGGTTGTAGGTGGTAGTGGATCAGGAAAGAGTACAGTTGTTTCCTTGATTGAAAGGTTCTATGATCCAAATGAAGGTCAAGTTCTGCTTGATAATGTGGACATCAAGACACTGCAACTAAAATGGTTGCGCGATCAAATCGGATTGGTGAATCAAGAACCTGCGCTGTTCGCAACCACCATTCTTGAGAACATACTCTATGGAAAACCTGATGCAACAATGGCTGAAGTGGAAGCAGCAGCTTCTGCTGCAAATGCTCATAGCTTTATTACCTTGCTTCCCAACGGCTATAACACTCAGGTGGGAGAACGAGGAGTGCAATTATCCGGAGGCCAAAAGCAGAGAATTGCAATTGCAAGAGCAATGTTGAAGAATCCAAAGATTCTGCTTTTGGATGAGGCAACAAGTGCTCTAGATGCAGGATCAGAGAGCATTGTTCAAGAGGCACTAGACCGGCTCATGGTGGGAAGAACAACCGTGGTTGTAGCGCATCGTCTTTCGACCATAAGAAATGTTGATACCATCGCCGTGATCCAGCAAGGACAAGTGGTGGAGACAGGAACACACGAGGAACTCATTGCCAAGGCAGGAACCTATGCATCACTAATTAGGTTCCAAGAAATGGTTGGAAATAGGGACTTCTCCAACCCCTCAACTCGCCGGACACGATCCTCCCGGCTCAGCCATTCCCTCTCTACAAAGTCCTTAAGCCTCCGATCTGGAAGCTTAAGGAACTTGAGCTACCAATACAGCACCGGAGCCGACGGCCGCATAGAAATGATATCTAATGCCGAGACGGATAAGAAGAATCCGGCCCCGGACGGATACTTCCTCCGGCTGCTGAAGATGAATGCCCCCGAATGGCCTTACTCAATCATGGGAGCCGTTGGTTCTGTTCTCTCCGGATTCATTGGGCCAACATTTGCAATTGTGATGAGTAACATGATTGAAGTCTTTTACTATAGAAACTATGCATCCATGGAGAAGAAAACCAAGGAGTATGTGTTTATATACATTGGAGCTGGACTCTATGCAGTTGGTGCATATTTGATTCAGCATTACTTTTTCAGTATCATGGGTGAGAACCTCACCACTAGGGTTAGAAGAATGATGCTTGCAGCTATATTGAGGAATGAAGTAGGATGGTTCGATGAGGAGGAACACAACTCAAGCCTGGTGGCAGCAAGGCTTGCAACGGATGCAGCTGATGTCAAGTCTGCCATTGCTGAGAGGATTTCTGTCATTTTACAGAACATGACTTCCCTCCTCACTTCTTTCATTGTTGCTTTCATTGTTGAATGGAGAGTTTCTCTTCTCATTCTTGCTACCTTCCCTCTCCTTGTCCTAGCTAATTTCGCTCAGCAACTTTCCCTAAAAGGTTTTGCTGGAGACACAGCGAAGGCGCATGCAAAAACAAGTATGATTGCTGGAGAAGGAGTGAGCAATATCCGAACCGTTGCAGCATTCAATGCACAGAACAAGATGTTATCGGTCTTCTGCCACGAGCTGCGAGTGCCGCAGATGCGAAGCCTTCGCCGGAGCCAGAGCTCCGGCATCTTGTTCGGCCTCTCGCAGCTCGCGCTTTATGCCTCCGAGGCTCTCATTCTATGGTACGGTGCACATTTGGTCAGCAAAGGAGTTTCAACCTTCTCCAAGGTCATTAAGGTCTTTGTGGTCCTTGTCATAACGGCCAATTCGGTTGCAGAGACCGTTAGCCTCGCCCCGGAGATAATTCGGGGCGGGGAAGCAGTTGGCTCTGTTTTCTCCATCCTCGACCGGCACACCAGGATCGATCCAGATGATCCTGATGCTGATCCGGTCGAGTCAATTCGTGGAGAAATCGAGCTTAGACATGTTGATTTCGCATACCCTTCGAGGCCAGATGTGATGGTTTTCAAGGATCTGAACCTCAGAATTAGGGCAGGCCAAAGCCAAGCCCTCGTCGGAGCGAGTGGATCGGGGAAGAGTTCGGTCATCGCCCTTATCGAGCGGTTCTACGATCCCATAGCCGGGAAAGTCATGGTGGACGGAAAAGACATAAGGAAGCTTAACTTGAAATCCTTGAGGCTCAAGATCGGTTTGGTCCAACAAGAACCGGCATTGTTTGCCGCCTCGATATTTGAAAACATTGCTTATGGAAAGGAGGGAGTGACGGAATCCGAGGTGATCGAGGCAGCTAGAGCTGCCAACGTGCACGCCTTTGTTAGTAGCCTGCCCGAGGGCTACAAAACACCCGTTGGCGAACGGGGCGTGCAGCTCTCGGGTGGACAGAAACAAAGGATTGCAATTGCTAGGGCTGTCCTTAAGGACCCTACAATATTGCTTCTTGATGAAGCAACAAGTGCACTTGATGCTGAGTCAGAATGTGTGCTACAAGAGGCATTGGAGAGGCTCATGAGGGGGAGGACCACGGTGCTCGTGGCGCACCGGTTGTCCACCATAAGAGGGGTTGATTGCATTGGTGTGGTCCAAGATGGGCGCATTGTGGAACAAGGTAGCCATTCTGAGCTTATAAGCAGGCCTGAGGGTGCATATTCTAGACTCTTGCAACTACAACATCATCACATTTGA 3777 0.4808 MAEGVSEANNTKASPSPLPPEAEKKKEQSLPFFKLFSFADKYDYMLMISGTIGAIVHGSSMPVFFLLFGQMVNGFGKNQMDLNKMTQEVSKYALYFVYLGLVVCISSYAEISCWMYSGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIVEDPLEGKCLGEVNGNIEFKDVGFSYPSRPDVMIFRNFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNEGQVLLDNVDIKTLQLKWLRDQIGLVNQEPALFATTILENILYGKPDATMAEVEAAASAANAHSFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTIAVIQQGQVVETGTHEELIAKAGTYASLIRFQEMVGNRDFSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMISNAETDKKNPAPDGYFLRLLKMNAPEWPYSIMGAVGSVLSGFIGPTFAIVMSNMIEVFYYRNYASMEKKTKEYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILATFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKMLSVFCHELRVPQMRSLRRSQSSGILFGLSQLALYASEALILWYGAHLVSKGVSTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEAVGSVFSILDRHTRIDPDDPDADPVESIRGEIELRHVDFAYPSRPDVMVFKDLNLRIRAGQSQALVGASGSGKSSVIALIERFYDPIAGKVMVDGKDIRKLNLKSLRLKIGLVQQEPALFAASIFENIAYGKEGVTESEVIEAARAANVHAFVSSLPEGYKTPVGERGVQLSGGQKQRIAIARAVLKDPTILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELISRPEGAYSRLLQLQHHHI* 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2047 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 365 608 IPR027417 -
Ahy10g2047 1258 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 23 1256 IPR039421 -
Ahy10g2047 1258 CDD ABC_MTABC3_MDL1_MDL2 1016 1254 - -
Ahy10g2047 1258 MobiDBLite consensus disorder prediction 1 25 - -
Ahy10g2047 1258 CDD ABC_MTABC3_MDL1_MDL2 371 608 - -
Ahy10g2047 1258 Gene3D ABC transporter type 1, transmembrane domain 34 982 IPR036640 GO:0005524|GO:0016021
Ahy10g2047 1258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 371 607 IPR003439 GO:0005524
Ahy10g2047 1258 SMART AAA_5 1043 1229 IPR003593 -
Ahy10g2047 1258 SMART AAA_5 398 584 IPR003593 -
Ahy10g2047 1258 Gene3D - 361 609 IPR027417 -
Ahy10g2047 1258 Gene3D - 1006 1255 IPR027417 -
Ahy10g2047 1258 PANTHER ABC TRANSPORTER TAP-LIKE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 23 1256 - -
Ahy10g2047 1258 Pfam ABC transporter transmembrane region 48 321 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy10g2047 1258 Pfam ABC transporter transmembrane region 694 965 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy10g2047 1258 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 50 336 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy10g2047 1258 SUPERFAMILY ABC transporter transmembrane region 675 995 IPR036640 GO:0005524|GO:0016021
Ahy10g2047 1258 CDD ABC_6TM_Pgp_ABCB1_D2_like 683 999 - -
Ahy10g2047 1258 CDD ABC_6TM_Pgp_ABCB1_D1_like 47 344 - -
Ahy10g2047 1258 Gene3D ABC transporter type 1, transmembrane domain 983 1005 IPR036640 GO:0005524|GO:0016021
Ahy10g2047 1258 Pfam ABC transporter 1035 1183 IPR003439 GO:0005524
Ahy10g2047 1258 Pfam ABC transporter 390 538 IPR003439 GO:0005524
Ahy10g2047 1258 SUPERFAMILY ABC transporter transmembrane region 34 356 IPR036640 GO:0005524|GO:0016021
Ahy10g2047 1258 ProSitePatterns ABC transporters family signature. 510 524 IPR017871 GO:0005524
Ahy10g2047 1258 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 694 981 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy10g2047 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1006 1254 IPR027417 -
Ahy10g2047 1258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1018 1252 IPR003439 GO:0005524
Ahy10g2047 1258 ProSitePatterns ABC transporters family signature. 1155 1169 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2047 Ahy-Chr10 108170133 108178780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2047 9 1254 Calmodulin-binding Proteins AT2G36910 53.901 0.0 1367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2047 K05658 - gmx:100797124 2264.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2534 20 133434919 133443865 Ahy10g2047 10 108170133 108178780 hybridization