Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2024 ATGGGTTTTGGGAATAATAAGAATAGTAGTAGCAGCAGCAGCAGCAACCACAACAACAACAACAACAACAACAACAATAATAATAATAATAATGTTATTAAAGCTGGAAGTTTGGATGTGGGAAAATCAAAGGGAAGGAAGAAGGGAGAGAATGAGAAAGGGTGGTGGCCTAAATTTAGTTTCTTTGGGAGCTGCATACCTTCAAGATCAAAGGTTGTTACCTCCATTAGTGGCACTACTTCTACTCAAACTGCAGAAATCAAATCTGTGTCGGAGAGCTGCACGAAAGAAACTGTTGCTCCTCCAGAGTCCACTATGACAACAACAACAAGCAATGAAGAGAGTATTCCTTCCACTCCAAAAGTTAGTGAGGAGTTGAAGGTAGCTTCTTGTTTGAGAAAATTCACATTCAATGGACTTAAGGTGGCAACTCGGAATTTCAGACCGGAGAGTCTTCTTGGAGAGGGAGGGTTTGGTTGTGTATTCAAGGGTTGGATTGAGGAGAATGGAATTGCACCCGTTAAACCGGGTACCGGTCTTACCGTTGCAGTCAAGACCCTGAACCACAATGGAAATCAGGGTCACAAAGAGTGGCTTGCTGAATTAAACTATCTCGGTGATCTTGTCCATCCTAATCTTGTTAAATTGATTGGTTTCTGTATAGAAGATGACCAGAGATTATTGGTTTATGAGTTTATGCCCCGAGGCAGTTTGGAGAATCACCTCTTTAGAAGACCCCTACCGCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAAAGGTCTTGCTTTTCTTCATGAAGAGGCTCAGAGGCCAATAATCTATCGCGATTTCAAGACATCCAATATCCTATTGGATGCGGAATACAATGCAAAGCTCTCTGATTTTGGACTTGCCAAAGATGGCCCTGAGGGGGAAAAGACACATGTATCAACAAGAGTCATGGGAACATATGGTTATGCTGCTCCGGAGTATGTCATGACCGGACATTTGACATCAAAAAGTGATGTCTACAGTTTCGGAGTGGTGCTTCTTGAAATGCTCACTGGCCGCCGAGCAATCGATAAGAGAAGACCAAATGGAGAACACAATCTGGTTGAGTGGGCTAGACCTGTACTTGGAGATCATAGGATCCTATTCCGGATAGTCGATCCCCGGCTTGAAGGGCACTTCTCGGTTAAAGGTGCACAGAAAGCTGCCCAGCTAGCTGCTCAATGCCTTAGCCGCGACCCGAAATCCAGACCTTTGATGAGTGAAGTTGTTCAAAGTTTAAAGCCATTGCCAAACCTTAAGGATATGGCCATTTCTTCTTACCACTTCCAGGTCACGCGAGTCGAGCGTACTTTCTCCATGCCAAATCATAAAAACGGCATCAAAACGCAGTTAGTAGCTTTACCAAAGAAAGGTCAACCTGTAAGGACATTGTCAACTCCAAATGTTCCACATGGTTCTCCATATCTTAATTATAGCAAGTCTCCGAAACCAAAGGATCTCAGATAA 1509 0.4347 MGFGNNKNSSSSSSSNHNNNNNNNNNNNNNNVIKAGSLDVGKSKGRKKGENEKGWWPKFSFFGSCIPSRSKVVTSISGTTSTQTAEIKSVSESCTKETVAPPESTMTTTTSNEESIPSTPKVSEELKVASCLRKFTFNGLKVATRNFRPESLLGEGGFGCVFKGWIEENGIAPVKPGTGLTVAVKTLNHNGNQGHKEWLAELNYLGDLVHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHEEAQRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRAIDKRRPNGEHNLVEWARPVLGDHRILFRIVDPRLEGHFSVKGAQKAAQLAAQCLSRDPKSRPLMSEVVQSLKPLPNLKDMAISSYHFQVTRVERTFSMPNHKNGIKTQLVALPKKGQPVRTLSTPNVPHGSPYLNYSKSPKPKDLR* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2024 502 Pfam Protein kinase domain 150 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g2024 502 MobiDBLite consensus disorder prediction 96 120 - -
Ahy10g2024 502 Gene3D Phosphorylase Kinase; domain 1 127 232 - -
Ahy10g2024 502 MobiDBLite consensus disorder prediction 475 489 - -
Ahy10g2024 502 Gene3D Transferase(Phosphotransferase) domain 1 233 448 - -
Ahy10g2024 502 ProSitePatterns Protein kinases ATP-binding region signature. 153 185 IPR017441 GO:0005524
Ahy10g2024 502 ProSiteProfiles Protein kinase domain profile. 147 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g2024 502 CDD STKc_IRAK 153 430 - -
Ahy10g2024 502 SUPERFAMILY Protein kinase-like (PK-like) 122 427 IPR011009 -
Ahy10g2024 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Ahy10g2024 502 PANTHER OS01G0588500 PROTEIN-RELATED 81 492 - -
Ahy10g2024 502 MobiDBLite consensus disorder prediction 1 51 - -
Ahy10g2024 502 MobiDBLite consensus disorder prediction 1 36 - -
Ahy10g2024 502 MobiDBLite consensus disorder prediction 96 119 - -
Ahy10g2024 502 PANTHER RECEPTOR-LIKE KINASE PLANT 81 492 - -
Ahy10g2024 502 MobiDBLite consensus disorder prediction 472 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2024 Ahy-Chr10 107487427 107492118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2024 133 443 Glycoside Hydrolase AT3G07070 55.414 3.45e-115 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Ahy10g2024 Pkinase 4.50E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2024 - - gmx:100499647 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2509 20 132599108 132603771 Ahy10g2024 10 107487427 107492118 hybridization
Ahy10g2024 10 107487427 107492118 Ahy14g2804 14 136400691 136404515 PCT
Ahy10g2024 10 107487427 107492118 Ahy4g2457 4 122009904 122013688 PCT
Ahy14g2804 14 136400691 136404515 Ahy10g2024 10 107487427 107492118 PCT
Ahy4g2457 4 122009904 122013688 Ahy10g2024 10 107487427 107492118 PCT