Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2018 ATGTCATGGCCTTCAGAAATAAAAAGCAATATTAATAACAAGGGAGGTGCAAACAAGGCTTGTGCTGCTTGCAAATTCCAAAGACGAAGGTGCACTAAGGATTGCATTCTCTCCCCTTATTTCCCATCAGATAAACCTACAACATTCACCAACGCACATCGTTTGTTTGGTGTTTGCAACATGACGAGGATTCTCAGCAAGATCAAACCAGAACAGCGGGATGAGTGCATGCAATCAATTATATTCGAGTCCGATATGCGTGCACAGTTTCCAGTAGGGGGTTGTTTAAGTATCATTCATTTGTATCAAGATCATCTAGCTAAGGTCAATGCCGAGTTACACAACGTGCAGAGGTGGATCGCTTATTTCAAACAACAAGAACAATACCACCTGCAGCAACAACAGCAGCAACAACAATATCTTTCTCTACCATTAATTATGACACCGGATCAGCCATATAATGAAAGGAAAGATAACTGCATCAACATTGTTGCTCTCCCGAGTATTGGTGGTGGTGTTAACGATAATAATGTTCAGAAAGAGAGTTCGGATGAAAAACTCAATTCAAAACTCGGAGCATTGTCAATGTGCCAACAATTTGTGGATTTAAAACCGTCAAAAGATAAATTAGGTGAATGCAGTACTTATTCTTGTCAGCAAGTTGAAAATCAAGTTTATGCAAATCAGATCGATCTGGATTCTGATCCGAAACGATTAAAGTTTTCTCCACGCAACAATACTTTTGACTACAAACACAAGGATGGAGGATCAAAGTACTCCTCTATTGGTAACCAATCCCTATAA 804 0.3943 MSWPSEIKSNINNKGGANKACAACKFQRRRCTKDCILSPYFPSDKPTTFTNAHRLFGVCNMTRILSKIKPEQRDECMQSIIFESDMRAQFPVGGCLSIIHLYQDHLAKVNAELHNVQRWIAYFKQQEQYHLQQQQQQQQYLSLPLIMTPDQPYNERKDNCINIVALPSIGGGVNDNNVQKESSDEKLNSKLGALSMCQQFVDLKPSKDKLGECSTYSCQQVENQVYANQIDLDSDPKRLKFSPRNNTFDYKHKDGGSKYSSIGNQSL* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2018 267 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 17 184 - -
Ahy10g2018 267 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 184 - -
Ahy10g2018 267 MobiDBLite consensus disorder prediction 236 267 - -
Ahy10g2018 267 MobiDBLite consensus disorder prediction 236 256 - -
Ahy10g2018 267 Pfam Lateral organ boundaries (LOB) domain 20 117 IPR004883 -
Ahy10g2018 267 ProSiteProfiles LOB domain profile. 19 120 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2018 Ahy-Chr10 107265077 107266384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2018 19 142 AS2 family AT3G13850 44.531 1.94e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy10g2018 LOB 4.10E-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2018 - - ahf:112717910 511.146