Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2014 ATGTCAGAAATGGCAAGCAAGCTGCACCTGAAGAAGGAGCTTACCCAAATTCGGAAAGCAGCTCGTGTCTTGAGGGATCCTGGCACCACTTCATCATGGAAGTCACCACTCAACTCCTCAAGATCTGCATCTGTATCTGCATGGAATTCTGCCTTCAACAACGTCCATGGCCCCACCACAACCACAAAGTTCACTTCCCATTCTCAACTTGACTCTCACGTGAACTCTGTGCCACCTACCACCAACAAGAGGGTCTTCTTGTACAATTGGAAGACCCATAAATCTTCCAGCGACAAGAATGACCGAGACCAAGACGAAGAAGAGGAAGAAGATGCTGCCATTGATGGATCTTCTTCTCTTCTAGGCAGTTTCGAGGACACGTTGAGTGATGCTCACAATGTCTGCGATTCTAAGAGCGACACATACTTAGGCGCCGGAGGAGGTGGCCCTCGGTCTTCTTCCATCTTTCGATGTGGAGACACCAATCTTATCTCCTTGGCCACACCCTCTGCCAGAAGAACAGCGCCTCCTAAGAAAAAGAGTAAAAAACCTAATAGCAACACCCTTTCCCATTTGGATCCCATGGCAAAGTTTCAGCATAGAGATACAAATCTCAATCTAGGTAGAAAAGTTTTCAAGTCCAATAATGCATTGTTGGAGGGGCTTCCTCCCATGCCCTTTACCAGGGATGACTCTATGGACCACTCTGATGACACTGAAGACTACTCTAATTCTGAAGATGTGAGACAGGCTTCGGGTTCTGCCACATCCCCTTTGCTCCTCAAACTCAAGCGCAAGAATTGGTCTCGATCTTCCTCAAAGTTATTGCGAACAAGCCGAAAGGAAGACTCCTCTTATTCCTACAGTACTCCTGCATTGTCAACCAGTTCTTACAATAGGTATGGACGCCAATATCCCAGCACTGTTGGCTCTTGGGATGGTACCACAACCTCAATGAACGATGGCGACGATGAGATAGATGATCGGTTGGATTTGCCTGGCCGACAAGGATGTGGAATTCCTTGCTATTGGTCAAAGAGGACTCCCAAACATAGAGGGATGTGTGGGAGTTGTTATTCTCCATCGTTGTCGGATACTTTAAGGAGGAAAGGAAGCAGCATACTCTGTGGTGGTCAAACTATTTATCCCAGACACCGGAGATCCTCTTCGGCCACCCACAAGCGCAGGATGTCTTGGAAGAGTGCTCAGGGTGTTATTCCATTGCTCACTAATGGTGGTGATGGTAGGATAGGGTCATCTATAGGAACTGGCAGGAGTGACGATGAACTTTCTACAAACTTTGGGGAGCTGGACCTTGAGGGCTTGAGTAGATTGGATGGAAGGCGGTGGTCATCAAGCTGTAGGAGTCAAGAGGGATTGGAGATTATAGCTCTCAATGGGGAAGGGGTGGAGGAGGAAGACACTCCAGAAAATAGTCGGAGTTTCAGTCAGAAGTATAGGCCTATATTCTTCAGTGAATTGATTGGGCAGAATATCGTGGTACAGTCACTTATGAATGCTGTTTCAAGGGGTCGAATAGCTCCTGTTTATCTTTTTCAAGGTCCCCGTGGGACTGGTAAAACATCAACAGCACGAATATTTGCTGCTGCACTGAATTGTGTGGCTCTTGATGAGAGTAAGCCTTGTGGCTACTGCAGGGAATGTACAGATTTTATTTCTGGCAAGAGCAGTGATCTACTGGAAGTTGATGGAACCAATAAAAAGGGAATTGATAAAGCTAGATATTTACTGAAAAGATTGTCAGTTGGTTCATCATCCGCTTCCACACGATATACAGTTTTTGTCATTGATGAGTGTCACCTGTTACCATCCAAGGCATGGCTGGGGTTTCTTAAGTTTCTCGAGGAACCACCTCAGCGAGTTGTATTCATATTCATCACATCTGATCTTGACAATGTGCCTCGAACAATACAATCCCGATGCCAGAAGTACCTTTTTAACAAAATTAAAGATGTGGATATTGTGAATAGATTGAGGAAAATATCTGCTCAGGAGAACCTTGATGTTGAAGAAGATGCTTTGGACCTCATTGCTACAAATGCAGATGGTTCACTTCGAGATGCAGAAACAATGTTGGAACAGCTTAGTTTGCTGGGAAAGAGAATTAGTACTTCTCTTGTCAACGAACTTGTGGGAGTTGTTTCAGATGAAAAACTATTGGAACTTTTGGAATTAGCAATGTCATCGAACACTGCAGAGACAGTGAAAAGAGCCAGAGAATTGATGGACTCTGGAGTTGATCCAATGGTTTTGATGTCTCAACTAGCTGGCCTCATTATGGACATCATTGCTGGATCATACACAGTCATTGATTCCAAACCGGATGAAGCATTCTTTGGTGGACGAAGCTTGAATGACTCGGAGTTGGAGAGGTTAAAGCATTCTTTAAAGCTTCTCTCAGAGGCCGAGAAACAGTTAAGGACTTCCAGTGAACGCTCAACATGGTTCACAGCAACACTCTTGCAACTTGGTTCTATGTCATCTCCAGATCTCACTCAGTCAGGCAGCAGCAGGAGGCAGAGCTGCAAAACAACTGATGATGATCCATCAAGTGCTTCAAGAGAAGTTACTGCTTCCAAGCATATGTCTGACCTTAAATATATGCCCTGGAAATCAATATCACCTACATCCCAGCAGAAAGCAGTAAATGGCAATTCTGGCCATCAAAGGGATATTTCCTCAAACATTGATGGTTTAAGCTTGAAATCAAAGCCATCAAATAGCCCAGTCATAGATGATGGCTCCACAATTGTCTCATCTGATGATATTATGGTTGGCAATATGATGTACAGATGCGTAGATTCTGGAAAGTTACATGATATCTGGGCACAGTGTATTGGGAGGTGTCACTCAAAGACATTGAGGCAGTTGCTACTCAATCATGGAAAGCTTGTATCCATATGTGAAGTTGAAGGTGTTTTGGTAGCATATGTTGCATTTGGGGATGGAGATATTAAACTCAGGGCAGACAGGTTTTCGAGAAGTATTACAAACTCCATGGAGATGGTTCTTAGACGCAATGTAGATGTCAGAATTATCCACTTGCCAGATGGTGTAGGTGAAACTCAGGTTAATATGCCAAGACAGGCTGAGTCAGCATTGACAAGTGAGAAGGAACAAAGAGGAGGTCGCGGGAATGGAACAGATCCTTTGCTTGATGGAAACCTTCAATCTGCAGCCGATTCCTCTGATGTTCTGGGTGAAAGAAATGGTGTGACGGAGAGAAGGCAAGATAATCCAATGCAGAGAATTGAATCCATCATTCGTGAGCAGAGGCTGGAAACTGCCTGGTTACAAGCTGTAGAAAAGGGTTCACCAGGATCATTGAGTCGCTTGAGACCTGAGAAGAATCAGGTCCTGCCACAGGAAGGTATCTATTGCATAGATCCAATGGAGTCCACGGATTCAGCAAGATTTTCCTCACAGCAGCATTGGGAAGATGAGCAGAGTAATGATGTCAAAATTTTGAACGTAAAAAATGGAAGGGTCTTGCAGAAAGACCAAACTGGTAGAAGGTATCCCATGTCCCCAAGTTTACTGCATGACAGCAGTTTAGCAGCAAGTTCTGGCAAAGACAATCCGGGATATGAATCGAGCTCGGGAGCTGGTGGTTGTGGATTTTTATGCTGGAACAAGGCAAAGCCTAGAAGGGTAGTCAAGGTACGAGGTGGTACTCCTGTTGGTGCGCGGAAAGTCGGGCGCTTCCCACTGTTTGGGGACTGTGGTAAGCACAAGAAAAGGGACGTGACCACATAA 3777 0.4501 MSEMASKLHLKKELTQIRKAARVLRDPGTTSSWKSPLNSSRSASVSAWNSAFNNVHGPTTTTKFTSHSQLDSHVNSVPPTTNKRVFLYNWKTHKSSSDKNDRDQDEEEEEDAAIDGSSSLLGSFEDTLSDAHNVCDSKSDTYLGAGGGGPRSSSIFRCGDTNLISLATPSARRTAPPKKKSKKPNSNTLSHLDPMAKFQHRDTNLNLGRKVFKSNNALLEGLPPMPFTRDDSMDHSDDTEDYSNSEDVRQASGSATSPLLLKLKRKNWSRSSSKLLRTSRKEDSSYSYSTPALSTSSYNRYGRQYPSTVGSWDGTTTSMNDGDDEIDDRLDLPGRQGCGIPCYWSKRTPKHRGMCGSCYSPSLSDTLRRKGSSILCGGQTIYPRHRRSSSATHKRRMSWKSAQGVIPLLTNGGDGRIGSSIGTGRSDDELSTNFGELDLEGLSRLDGRRWSSSCRSQEGLEIIALNGEGVEEEDTPENSRSFSQKYRPIFFSELIGQNIVVQSLMNAVSRGRIAPVYLFQGPRGTGKTSTARIFAAALNCVALDESKPCGYCRECTDFISGKSSDLLEVDGTNKKGIDKARYLLKRLSVGSSSASTRYTVFVIDECHLLPSKAWLGFLKFLEEPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDVDIVNRLRKISAQENLDVEEDALDLIATNADGSLRDAETMLEQLSLLGKRISTSLVNELVGVVSDEKLLELLELAMSSNTAETVKRARELMDSGVDPMVLMSQLAGLIMDIIAGSYTVIDSKPDEAFFGGRSLNDSELERLKHSLKLLSEAEKQLRTSSERSTWFTATLLQLGSMSSPDLTQSGSSRRQSCKTTDDDPSSASREVTASKHMSDLKYMPWKSISPTSQQKAVNGNSGHQRDISSNIDGLSLKSKPSNSPVIDDGSTIVSSDDIMVGNMMYRCVDSGKLHDIWAQCIGRCHSKTLRQLLLNHGKLVSICEVEGVLVAYVAFGDGDIKLRADRFSRSITNSMEMVLRRNVDVRIIHLPDGVGETQVNMPRQAESALTSEKEQRGGRGNGTDPLLDGNLQSAADSSDVLGERNGVTERRQDNPMQRIESIIREQRLETAWLQAVEKGSPGSLSRLRPEKNQVLPQEGIYCIDPMESTDSARFSSQQHWEDEQSNDVKILNVKNGRVLQKDQTGRRYPMSPSLLHDSSLAASSGKDNPGYESSSGAGGCGFLCWNKAKPRRVVKVRGGTPVGARKVGRFPLFGDCGKHKKRDVTT* 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2014 1258 MobiDBLite consensus disorder prediction 1172 1204 - -
Ahy10g2014 1258 MobiDBLite consensus disorder prediction 167 197 - -
Ahy10g2014 1258 MobiDBLite consensus disorder prediction 219 256 - -
Ahy10g2014 1258 MobiDBLite consensus disorder prediction 1188 1203 - -
Ahy10g2014 1258 CDD AAA 495 653 - -
Ahy10g2014 1258 Pfam DNA polymerase III subunits gamma and tau domain III 710 830 IPR022754 GO:0003887
Ahy10g2014 1258 MobiDBLite consensus disorder prediction 1075 1089 - -
Ahy10g2014 1258 Gene3D - 658 719 - -
Ahy10g2014 1258 Pfam DNA polymerase III, delta subunit 496 656 - -
Ahy10g2014 1258 MobiDBLite consensus disorder prediction 271 292 - -
Ahy10g2014 1258 MobiDBLite consensus disorder prediction 834 867 - -
Ahy10g2014 1258 CDD HLD_clamp_pol_III_gamma_tau 656 719 IPR045085 -
Ahy10g2014 1258 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 205 1192 - -
Ahy10g2014 1258 Gene3D - 473 654 IPR027417 -
Ahy10g2014 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 506 703 IPR027417 -
Ahy10g2014 1258 MobiDBLite consensus disorder prediction 1030 1089 - -
Ahy10g2014 1258 MobiDBLite consensus disorder prediction 230 245 - -
Ahy10g2014 1258 PANTHER PROTEIN STICHEL-LIKE 1 205 1192 - -
Ahy10g2014 1258 SUPERFAMILY post-AAA+ oligomerization domain-like 727 828 IPR008921 GO:0003677|GO:0006260
Ahy10g2014 1258 MobiDBLite consensus disorder prediction 883 920 - -
Ahy10g2014 1258 MobiDBLite consensus disorder prediction 93 119 - -
Ahy10g2014 1258 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 481 830 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Ahy10g2014 1258 SMART AAA_5 513 663 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2014 Ahy-Chr10 107058223 107065791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2014 477 771 Core DNA Replication Machinery Family AT1G21690 25.000 2.08e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2014 - - adu:107471079 2419.42