Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1987 ATGAAGAGGACAAGGGATGATGCTTTCTCTGGCTCTCAATTCAAACGGCCCTTTGCTTCCTCACGTGGTGATTCCTATGGCCAAACCCAAGGTGCTGGAGGAGGAAGTGGAGGTGGTGGTGGTGGAGGAGCAACCCCGTCTCAGAAATTGACAACCAATGATGCCTTAACTTATTTGAAGGAAGTGAAAGACATGTTTCAGGATCAGAGAGAAAAATATGACTTGTTCCTTGAGGTCATGAAAGATTTCAAGGCTCAGAGGACTGACACTGCTGGTGTCATAGCAAGGGTGAAGGAGCTATTCAAAGGGCACAACAATTTGATATTTGGATTTAACACTTTCTTGCCTAAGGGATATGAGATAACACTTGATGAGGAAGAGGCTCCTCCGAAGAAAACAGTTGAATTTGAAGAAGCGATTAGTTTTGTGAACAAGATAAAGAAACGATTCCAAAATGATGAGCATGTTTACAAATCATTCTTGGACATTTTGAACATGTACCGCAAAGAGCACAAGGACATTGGTGAGGTTTATAACGAGGTTGCTACCCTTTTCAAGGACCATAGAGATTTGCTTGATGAGTTCACTAGATTCTTACCAGATACTTCTCAAGCACCTTCTGCACAGCATGCTCCATATGGTCGAAGTTCATTGCAACGATTCAATGAGCGGAGTTCTACAGCACCCATGATGCGACAAGTGCATGTAGACAAGCAACGTTATCGACGAGACAGGATTCTTGGCTCTCATGATCGTGATCAGAGCGTTGATCGAGCTGATCTGGATGATGACAAAATAAACATGCACAAGGAGCAGAGGAAACGTGAGAATAGGGATAGAAGAGTCCGTGATCATGATGAGAGAGAACAAGATCTTGATAATGGCAGGGATTTGAACTTGCAACGCTTTCAAGACAAAAAGAAATCTGTCAAGAAGGCGGAAGGGTTTGCCATGGCTTCTGACTTTCCTTCATATGATGACAAAGATGCGTTAAAGACCATGTATGGTCAAGCATTCAGCTTCTGCGAGAAAGTTAAGGAGAAGTTGAGCAGTTCTGATGACTACCAAGCATTCTTGAAGTGCCTTCACATTTTCAGCAATGGGATAATAAAAAGGAACGATTTGCAAAATTTGGTAACTGATTTACTTGGAAAACACTCCGATCTATTGCATGAATTCAATGATTTCCTGGAGCGTTGTGAAAATATTGATGGATTCCTTGCTGGTGTCATGAGTAAAAAGTCCCTGTCTACCGATGGTCATATATCAAGATCATCAAAGTTGGAGGACAAAGATAAAGAGCACAAGCGTGAGATGGATGGACCTAAAGAGAAAGAAAGATACAGTAAATACTCGGGAAAATCCATTCAAGAACTTGATCTTAGTGATTGCAAACGTTGTACTCCAAGCTACAGGCTGCTGCCTGCAGATTATCCAATTCCTGTGGCTAGTCAGAGATCTGAACTTGGAGCTCAAGTATTGAATGACCATTGGGTATCTGTGACTTCAGGAAGCGAGGATTACTCTTTCAAACATATGCGCAGGAATCAGTATGAAGAAAGCTTATTCAGATGCGAAGATGACAGATTTGAAATGGACATGCTATTAGAGTCAGTGAGTTCTGCTGCGAAACGTGTAGAGGAGTTGTCTAATAGCATTAATGAGAATAAGATGGAGAACCTGGGCCGGATTGAAGATCAATTCACTGCTTTAAATTTAAGGTGTATTGAACGTTTGTACGGTGACCATGGTCTCGATGTGATAGACATTTTGCGTAAAAATCCAACTCATGCTCTGCCTGTAATATTGACTCGACTTAAGCAGAAACAAGAGGAGTGGACTAAGTGTCGTGCAGATTTCAATAAAGTTTGGGCTGAAATTTATGCTAAGAACCACTACAAGTCACTCGATCACCGTAGCTTCTATTTCAAGCAACAAGATTCAAAGAACTTGCACACGAAATATTTGGTGACTGAGATTAAAGAAATTAAAGAGAAGCAGCAAAAAGAGGATGATATTCTTCAGTCCATTGCTGCTGGAAGTAAACAGCCTCTAACTCCACATCTTGAGTTTGAATATCCTGATGCTGCAATTCATGAAGACTTGTATAAACTTATTCGGTATTCATGTGAGGAGATTTACTCTAGTAGGGAGTTGATGAATAAAACTATGAGGCTCTGGTGTACCTTTTTGGAGCCGATGCTTGGTGTTCCTTCCCGATCACATGGGACAGAAAAGGTGGAAGAGAGGAAAGCAGGGCCTAATGTTGGCAATGCAGGCAATGGAAGTCCTCATGGAGACTCCATTTCAATTAATTCAAGGTTACCAAAATCTGACAAGAATGAAGCGGATGGTAGAGTACCTGATGTAAAGAATGTTCACCGGACTAGTGCTGCAGCTAATGATAAAGAAAATGGATCTGTTGGTCGTGAAAATTTCTGTAGAGATGAACCCCCACTGGATAAAGGGCAGACAAATATAGAGTGCAACAATAAAGTCTCTGGGATTAATAAACAATTTTCTGCTGATGAACAAGGAGCTAAAAACAATGCATTAATTTCAGTTAGAGGAGAAAAATTAGAAGATAATCCTAGCAGGAACAACGAAGAATTGACTCCAGGCGCTGTCACTACTCCTTCTCGACCTACTGACGCTGACGAATCCGTACCTAAACCTCAGGAAGTAAATGCTACTTTGGTAGAGGGGTCTGATGTTACAGCTCCAGTTACAGTGGCCGATGGGGTACCAACTCAGAGCAGTAAAGTTAGAAGCCATGAAGAATCTGCTGGGCCTTGTAAAACTGAGAAGGAAGAGGGCGAGTTATCACCAAATGGTGATTCGGAGGAGGATAACTTTGTTGCTTATGGAGATTCAAATGTGCAGTCAATGTCCAAGTCAAAGCACACTATTGAGAGAAGAAAATATCAGTCCAGAATTGGAGAGGATGAGTCCTGCCCAGAGGCTGGAGATGCAGATGATGAGGACAGTGAAAATGTGTCTGAAGCTGGTGAAGATGTCTCGGGCAGTGAATCTGCTGGTGATGAATGCTTCCGAGAGGACCACGAGGATGAGGAAGATATAGAGCATGATGATGTTGATGGTAAGGCTGAGAGTGAAGGTGAAGCAGAGGGTACATGTGATGCACAATCTGCTGGAGGAGATGGTTCATCTCAGCCACATTCAGAAAGGTTTCTTTCGTCTGTGAAACCTCTGACAAAGCATGTTTCAGCAGTGTCATATGTTGAAGACATGAAGGATTCAAGGGTGTTTTACGGAAATGATGATTTCTATGCACTTTTTAGGCTTCATCAACTTCTTTATGAAAGGATCTTGTCTGCAAAAACCAATGCCACGAATTCAGAAATGAAATGGAAAGCCAAGGATGCCAGCTCCCCAGATCCTTATTTGAAATTTATGGATGCATTGTACAGCCTTCTTGATGGATCTTTTGAGAATGCAAAGTTTGAAGATGAATGCCGAGCAATTATTGGCAACCAGTCATATGTGTTATTCACATTGGACAAATTAATATATAAACTAGTTAGACATCTTCAAAATGTTGCAACAGATGATATGGCCAATAAGCTGCTCCAATTGTATGAGTACGAAAAGTCTCGGAAACCTGGGAAACTAAACGATTCAGTATATCATGCAAATGCACATGTTATACTTAATGAGGACAATATATATCGATTGCAATGTTCCTCACCACCCTCTCGGCTATCCATCCAGCTCATGGACAATATGAATGAAAAGCCTGAGATGTTTGCTGTTTCTATTGATCCAAATTTTTCTTTTTACCTTCACAATGATTTTCTCTCCGTCCTTCCTTCTAAAAAGGAACCCCATGGCATTTTACTTCAAAGAAACAAACGCAAATTTGGAGATATTGATGAGCTTTCTGGAATAACTTCTGCTATGGAAGGTGTCAAGCTAATTAATGGCTTGGAATGTAAGATAGCTTGCAGCTCGTCCAAGATCTCCTATGTTCTCGACACACAAGATTTCTTTTTCCGGCCGAAAAGGAGAAGGCAAGCGTCACCGGAAACCAGATCTTGTCGGCACCGGAGGGACAGAGAGGAAAGATACCGCAGGTTGATGGCGACCGTGTCTCAATGA 4119 0.4168 MKRTRDDAFSGSQFKRPFASSRGDSYGQTQGAGGGSGGGGGGGATPSQKLTTNDALTYLKEVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNNLIFGFNTFLPKGYEITLDEEEAPPKKTVEFEEAISFVNKIKKRFQNDEHVYKSFLDILNMYRKEHKDIGEVYNEVATLFKDHRDLLDEFTRFLPDTSQAPSAQHAPYGRSSLQRFNERSSTAPMMRQVHVDKQRYRRDRILGSHDRDQSVDRADLDDDKINMHKEQRKRENRDRRVRDHDEREQDLDNGRDLNLQRFQDKKKSVKKAEGFAMASDFPSYDDKDALKTMYGQAFSFCEKVKEKLSSSDDYQAFLKCLHIFSNGIIKRNDLQNLVTDLLGKHSDLLHEFNDFLERCENIDGFLAGVMSKKSLSTDGHISRSSKLEDKDKEHKREMDGPKEKERYSKYSGKSIQELDLSDCKRCTPSYRLLPADYPIPVASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFEMDMLLESVSSAAKRVEELSNSINENKMENLGRIEDQFTALNLRCIERLYGDHGLDVIDILRKNPTHALPVILTRLKQKQEEWTKCRADFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLHTKYLVTEIKEIKEKQQKEDDILQSIAAGSKQPLTPHLEFEYPDAAIHEDLYKLIRYSCEEIYSSRELMNKTMRLWCTFLEPMLGVPSRSHGTEKVEERKAGPNVGNAGNGSPHGDSISINSRLPKSDKNEADGRVPDVKNVHRTSAAANDKENGSVGRENFCRDEPPLDKGQTNIECNNKVSGINKQFSADEQGAKNNALISVRGEKLEDNPSRNNEELTPGAVTTPSRPTDADESVPKPQEVNATLVEGSDVTAPVTVADGVPTQSSKVRSHEESAGPCKTEKEEGELSPNGDSEEDNFVAYGDSNVQSMSKSKHTIERRKYQSRIGEDESCPEAGDADDEDSENVSEAGEDVSGSESAGDECFREDHEDEEDIEHDDVDGKAESEGEAEGTCDAQSAGGDGSSQPHSERFLSSVKPLTKHVSAVSYVEDMKDSRVFYGNDDFYALFRLHQLLYERILSAKTNATNSEMKWKAKDASSPDPYLKFMDALYSLLDGSFENAKFEDECRAIIGNQSYVLFTLDKLIYKLVRHLQNVATDDMANKLLQLYEYEKSRKPGKLNDSVYHANAHVILNEDNIYRLQCSSPPSRLSIQLMDNMNEKPEMFAVSIDPNFSFYLHNDFLSVLPSKKEPHGILLQRNKRKFGDIDELSGITSAMEGVKLINGLECKIACSSSKISYVLDTQDFFFRPKRRRQASPETRSCRHRRDREERYRRLMATVSQ* 1373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1987 1372 MobiDBLite consensus disorder prediction 423 452 - -
Ahy10g1987 1372 MobiDBLite consensus disorder prediction 857 1063 - -
Ahy10g1987 1372 Gene3D Paired amphipathic helix 328 402 IPR036600 GO:0006355
Ahy10g1987 1372 ProSiteProfiles PAH domain profile. 132 202 IPR003822 GO:0006355
Ahy10g1987 1372 ProSiteProfiles PAH domain profile. 48 118 IPR003822 GO:0006355
Ahy10g1987 1372 SUPERFAMILY PAH2 domain 46 117 IPR036600 GO:0006355
Ahy10g1987 1372 MobiDBLite consensus disorder prediction 777 791 - -
Ahy10g1987 1372 MobiDBLite consensus disorder prediction 417 452 - -
Ahy10g1987 1372 MobiDBLite consensus disorder prediction 966 985 - -
Ahy10g1987 1372 Gene3D Paired amphipathic helix 54 116 IPR036600 GO:0006355
Ahy10g1987 1372 PANTHER SIN3B-RELATED 1 1360 IPR039774 GO:0003714
Ahy10g1987 1372 MobiDBLite consensus disorder prediction 14 32 - -
Ahy10g1987 1372 MobiDBLite consensus disorder prediction 761 776 - -
Ahy10g1987 1372 Pfam Sin3 family co-repressor 465 559 IPR013194 -
Ahy10g1987 1372 MobiDBLite consensus disorder prediction 202 304 - -
Ahy10g1987 1372 MobiDBLite consensus disorder prediction 738 828 - -
Ahy10g1987 1372 MobiDBLite consensus disorder prediction 1017 1032 - -
Ahy10g1987 1372 MobiDBLite consensus disorder prediction 926 941 - -
Ahy10g1987 1372 PANTHER PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 2 ISOFORM X1 1 1360 - -
Ahy10g1987 1372 SMART hdac_interact2seq4b 463 563 IPR013194 -
Ahy10g1987 1372 Gene3D Paired amphipathic helix 131 203 IPR036600 GO:0006355
Ahy10g1987 1372 SUPERFAMILY PAH2 domain 129 201 IPR036600 GO:0006355
Ahy10g1987 1372 MobiDBLite consensus disorder prediction 235 304 - -
Ahy10g1987 1372 Pfam Paired amphipathic helix repeat 155 199 IPR003822 GO:0006355
Ahy10g1987 1372 Pfam Paired amphipathic helix repeat 353 397 IPR003822 GO:0006355
Ahy10g1987 1372 Pfam Paired amphipathic helix repeat 71 115 IPR003822 GO:0006355
Ahy10g1987 1372 Pfam C-terminal domain of Sin3a protein 1090 1337 IPR031693 -
Ahy10g1987 1372 MobiDBLite consensus disorder prediction 808 822 - -
Ahy10g1987 1372 SUPERFAMILY PAH2 domain 333 400 IPR036600 GO:0006355
Ahy10g1987 1372 MobiDBLite consensus disorder prediction 986 1001 - -
Ahy10g1987 1372 MobiDBLite consensus disorder prediction 867 884 - -
Ahy10g1987 1372 MobiDBLite consensus disorder prediction 1 49 - -
Ahy10g1987 1372 MobiDBLite consensus disorder prediction 202 229 - -
Ahy10g1987 1372 ProSiteProfiles PAH domain profile. 331 400 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1987 Ahy-Chr10 106633703 106649404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1987 22 151 WRKY Transcription Factor Family AT4G12020 44.138 6.12e-23 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy10g1987 Sin3a_C 1.50E-52 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1987 K11644 - gmx:100807181 2171.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2470 20 131498901 131515943 Ahy10g1987 10 106633703 106649404 hybridization