Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1983 ATGGATCCACCACTTTGTGCCAATGGTTGCGGCTTCTATGGTTCTGCTGCCAACAACAATCTTTGCTCAAAGTGTTACAAAGATCACATCAAACAAACCTTCATCATCATGGAATCACAAAACTTTGGTGCAACCATTGATGATATTTCTACCAACAACAACAACAATGAAACGAAGAAAAGGTGCAAGAAGTGCAATAAAAAAGTTGGATTAACAGGGTTTGAGTGTCGATGTGGAGATTTGTTTTGTGGAAAGCATAGGTATCCAGAAGTTCATGAATGTGAATTCAATTTTAAGGATATTGGTCGCAACATTTTGGCAAAACAGAACCCTCTTTGCATTCGTGATAAGTTAGATAAAAGAATTTAG 369 0.3713 MDPPLCANGCGFYGSAANNNLCSKCYKDHIKQTFIIMESQNFGATIDDISTNNNNNETKKRCKKCNKKVGLTGFECRCGDLFCGKHRYPEVHECEFNFKDIGRNILAKQNPLCIRDKLDKRI* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1983 122 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 3 122 - -
Ahy10g1983 122 Gene3D - 51 106 IPR035896 -
Ahy10g1983 122 ProSiteProfiles Zinc finger AN1-type profile. 56 102 IPR000058 GO:0008270
Ahy10g1983 122 Pfam AN1-like Zinc finger 62 97 IPR000058 GO:0008270
Ahy10g1983 122 Gene3D - 1 50 - -
Ahy10g1983 122 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 122 - -
Ahy10g1983 122 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Ahy10g1983 122 SUPERFAMILY AN1-like Zinc finger 51 114 IPR035896 -
Ahy10g1983 122 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
Ahy10g1983 122 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Ahy10g1983 122 SMART AN1_Zf_4 62 99 IPR000058 GO:0008270
Ahy10g1983 122 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1983 Ahy-Chr10 106365497 106365985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1983 5 120 C2H2 Transcription Factor Family AT3G52800 37.419 6.62e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1983 - - adu:110276973 228.409