Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1947 ATGGATGATCATAAATCTGAGGATCAACACCTGGTGGCGGCAGCGCAGCACATTTTAAAGGCGTTGGCGGCAAGCAAGGCTGTCTCCGATGATCTGAGAAAAACTCTCTTGGATTTCGATATTCATCTGTCAGCCATGTCCATAGTTGAAAGGAGCATCAAGCAGCTAGAAAGGAAAATTAAATTTGCCGAAGGCAAAATAATGGCTTGGAAAGCAAAGAATTCGATGATATGGGACTGCAGTTCCAAGGAATCTTCCGAGTATTTAGAAGCAGTTAGTGAGATTCAAGCAGCCCTTCACAACTTGCAGAGTTTGAATGAACACGATAAAGATAAAGAACTACTCGGAAGAGCCAACCGAATCTTGCAGGTTGCCATAGCGAAACTGGAGGAAGAATTAGTTCATATCCTCGTTAAGCACAAGCAATACCTTGAACCGGAATCTTTCGCGAACGAGGCCGGTTCAGTTGATCTGGTTAATCCTGCGTTAATTCCAGATCTCAAGAGCATTGCAAATGTCATGTTCGGTTCCAAGTACCATCAGGAGTTTTGCCAGACTTTCATTTCTTCGAGACGTCACGCCTTGGACGAGTTCTTTGTGGTTCTTGAAATAGAAAGATTCAGCAACGAGAACGTCATGAAAATGGAAGGGAATTGCTTGAATCGCGAGATAAAGAAGTGGATTCGCGCCGTGAAGATAGTCTTTCAGGTGTATCTCGTCGCAGAGAGACGGTTGTGTAAGCAAATTCTTGGAGACTTCAACGACTCTGTTTATCAGTTCTGCTTCGCCGAGATAACTTTGAGTTTTGTGTTGAAACTTTTGAATTTTGGTGAGGCCGTAGCAACGGGAAACCGTTCGCCGGAGAAACTGTTCTGTTTTCTAGACATCTATGAAGTTTTGGAGAATCTCGCTGTCTATGTAGACATTTTGTTCTTTGAAGAATTTGGTTCATTTGTAAGAGATGAGTTTCACAAGCTTCTAAACAAGTTTGGTGAAGCTTCAAAGTTCACATTCTTAGCATTTAAAAGTGCTATTGCAAATGATCCTTCAAAGGCGCGATTCCCTGGCGGCGGAGTTCACCATCTTACCAAATATGTAATGAATTTCATCAAGACACTGGCGGAATACGGCGAGGCACTCAACCTTCTCCTGGCGGACGAGACTCCGGCCGATCCGGACGACGACGGCCATCCTTTGGCTCGCGAATTCTGGTCGGTGGCGGCCACTCTTGAATCCAACCTGATCAATAAGTCCAAATTGTACAAAGATGTGGCATTGCAACATGTATTCATGATGAATAACATTCACTACATGGTCCAAAAGGCTAAGTCCTCGGAACTAAGCTTAGTATTCGGCGATCGATGGCTTCGTCGGCACATTGCTAAGTTCCGAGATAATGCTAGAAGCTATGAGAGGGTAACTTGGGGTCCAATACTCTCTATTCTGAAACAAGAAAACACTGAATCGAATTGCACTTCTTCGAAGGAAAATCTAAAGAAAAAGTGCAAAGATTTCAATGCTTCTTTTAGTGAAACCTATAGGTCACAAACAGGGTGGTGTATTCCAGATACTGAACTCCGTGAAGATGTACAAATCTTAATTTCTCAGAAAGTTGTTCATGCTTACCGGCAATTCACTGGGAGATATTCATCAAGCATTGATGAGAAGTGGAAAAAGTACACTGTAGATGATATAGAGAACTATGTATTGGACCTTTTTGTAGGTTCACCAAAGTCTTTGCATTATTTTTCATCATCAGCACAGATACTGAAAAGGGATAAGAGTGTTTGA 1791 0.4255 MDDHKSEDQHLVAAAQHILKALAASKAVSDDLRKTLLDFDIHLSAMSIVERSIKQLERKIKFAEGKIMAWKAKNSMIWDCSSKESSEYLEAVSEIQAALHNLQSLNEHDKDKELLGRANRILQVAIAKLEEELVHILVKHKQYLEPESFANEAGSVDLVNPALIPDLKSIANVMFGSKYHQEFCQTFISSRRHALDEFFVVLEIERFSNENVMKMEGNCLNREIKKWIRAVKIVFQVYLVAERRLCKQILGDFNDSVYQFCFAEITLSFVLKLLNFGEAVATGNRSPEKLFCFLDIYEVLENLAVYVDILFFEEFGSFVRDEFHKLLNKFGEASKFTFLAFKSAIANDPSKARFPGGGVHHLTKYVMNFIKTLAEYGEALNLLLADETPADPDDDGHPLAREFWSVAATLESNLINKSKLYKDVALQHVFMMNNIHYMVQKAKSSELSLVFGDRWLRRHIAKFRDNARSYERVTWGPILSILKQENTESNCTSSKENLKKKCKDFNASFSETYRSQTGWCIPDTELREDVQILISQKVVHAYRQFTGRYSSSIDEKWKKYTVDDIENYVLDLFVGSPKSLHYFSSSAQILKRDKSV* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1947 596 Gene3D Exocyst complex component Exo70 68 581 - -
Ahy10g1947 596 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 152 581 - -
Ahy10g1947 596 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 18 150 - -
Ahy10g1947 596 Coils Coil 46 73 - -
Ahy10g1947 596 Coils Coil 112 132 - -
Ahy10g1947 596 Pfam Exo70 exocyst complex subunit 225 570 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ahy10g1947 596 PANTHER EXOCYST COMPLEX PROTEIN EXO70 152 581 IPR004140 GO:0000145|GO:0006887
Ahy10g1947 596 PANTHER EXOCYST COMPLEX PROTEIN EXO70 18 150 IPR004140 GO:0000145|GO:0006887
Ahy10g1947 596 SUPERFAMILY Cullin repeat-like 75 573 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1947 Ahy-Chr10 105459041 105460831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1947 8 573 EXO70 exocyst subunit family AT5G61010 40.129 5.51e-151 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1947 K07195 - gmx:100791622 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2427 20 129833812 129835608 Ahy10g1947 10 105459041 105460831 hybridization