Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1935 ATGGCTGCAAAGCTTCTGCATTCTTTGGCAGATGATAACCCAGATCTGCAGAAGCAGATTGGATGTATGACTGGGATTTTCCAGCTCTTTGATCGCCACCATGTTCTTGCGCCTCGCCATAAGAGGATTTCTGCTGGCAATCCTCACTTCGGTGATGGCAGCTTGGAAACAGATTCGAATAACATGCTCCATCAACAGACAACAATGGATATGAACTTCAAGAAGGGTGTGAATGAAAAACAGAGAACCTCGACTGAATCGTCAAGACCATCCTTCTCTTCTTGTTCATCATCACTATCCTCCTTGGATTGTAAGGCCGAAGCTGAAGCTACCTTCGACGGGATTGTTTTTCCTGAAACTCTTTCAACTATCTCTCCCCATTTAGCACGTCACACACTTGACCTTAGGGATGTAGTGAAGGATTCAATGTATAGGGAGCCCCGAGGGCTGTCGGTTAAGACTACTGCCAAAGAGGAAGCTGCCTTTCATACTATGAAGCACAAGGATTCTCCGCGACCTTTTCGTCCGTCGAAAGCTGTTGATGGATGTTATGGAGTTGGAATAGATGGGAAACATAGTGTGCCTGTTGATCTAAATGATTCCATGCGAGTGCTTGCTAAACTTAGAGAGGCACCTTGGTATTATGGAGAAATGAGACCGTCGCATGAAGTGAAAGACGGAAAATGGCATTCAATCTCAAAGGATTCCCCTCGGTTTGCTTATGACAGAAGGGAAACCAGCCGTTTTTCTTTTGAATCCCACGACACTATCAAATCGACACCAAAGATAAGAGAATTTCCAAGACATTCACTAGATAGTAGGGAAGGCACGTGGCGCGGTCACAATGCCGAATCAAAACCAAGTCACCACTCAAGCAAAGCTTACAGCTGCACCTCCACCTCAAATAACAAAGTTTCTAGCCCACAACAGTCTTCGACTATCCAGAGCCGGCCTCCGAGTGTTGTAGCAAAGTTAATGGGCTTGGAAGCATTGCCGGATTCTGCTTTGGCCAGTTATACTCAATCAAGTCCAGGTGAGACTTACACAGCTCAAGATAATGGTCAGTTTCCAATATCAAGAGATGGATTCACCTGGCCACTCCGAGTTTCTAGTTCCCCGAAAATCTCATTGAAAGACCCAACATCCCCTCGGCGGAAGAATGCTGATCTGGTTATGAAACCCATCTCAAGTGCTAGAGTTCCCATTGAGCCTGCACCATGGAAGCAGCAGGATGGAAATAGAAGCTCTCAGAAAACAAGTTCAACAGCAACAAAAGCTCCCGCAAGAACACCGGATTCATTTACCTCGGTTTATAGTGACATTGAGAAGAGATTGAAGGATCTTGAGTTCAAACAATCTGGAAGGGATCTCAGAGCATTAAAACAGATACTAGAAGCAATGCAAGAAAAGGGACTATTAGACAACAGAAAAGAAGAGCAAGCTCCAAATGTTGCTCGAAATCAAAGAGACTATGAACCAAAAGTTATCAATTTAATCGAGAATTCTACATCGGCAAGGCATCAAAATCCCCAAGGAAACAATGCTCTGTCGTCTACAATCAAGGGATATGACTCGGCAAGAGCGTTTGAATCCCCGATAGTGATCATGAAACCTGCGAAATTTGTTGAGAAAACCAGGATTTCTGCTTCTTCAGTCACACCAATTGGTTCCCAGAAACTCCAGAGCAGTGGTGCATATGTAAATAAAAATGCTCTGTCTTCAACCGGGGAAGTGAAAGATCAGCCTTCTAACACTAGTCACTGCAACCGTGATGCTTCTACGAGTGCCGTCGATAAGAAAGCAAGAAATGGGAAGACTATGAAACAAGCACAAACACAAACAAGGTCTCAACAATTTCCAAGAGAGAATAGCCCGAGTTCGGTAAAGCACTCCAGATCTGTAAGCCCAAGAATGCAACAGAAGAAGTTGGAGTTAGATAAGAGAGCTCGTCCGCCTGCGCCACCAGTGGACTCGAACAAACCAAGAAGGTTAACTGGTAAGAAGACGGCAGAATTAGGTCCCCCGGCCGGAAAAATAAGGCCAAAAGGCCGCAACTCACGGCCTGGTGACGAGCAAATGAGCGAGGCAAGCACTGAATCAAGAAGCTTAAGTTGCCAAGGGGACGATGTTTCTCTGAAGTCCGATGGTATCACCGTCGATTCAAAGACGGATATTGAATTCACCAGCAGTTTAAGATCTGCTGAAATTGAAGATGGCCAGAGCCCATCCTTGAAGGCTATGAAGCAATTGGTTTCACAAACAGTGCAAAAATCATCTGAGAGGTTGGATCAGGATGAGACAGTTGCTGAACTTGCAACCGTTGCCCCGGAGAATCCAAGTCCTATGTCATCTCCAGGAAAGAAGACACCGGAAGAGCGAAAAGCAGATAATGAGAATCAAGATCTGTGGAACACTGCGGATAGCCTTTCTTTTAACAGCTCCGGTGAGATGAATCGCAAGAAACTGCAGAGCATAGATCATCTTGTTCAGAAGCTCAGACGGCTAAACTCTAGTCACGACGAAGCTAGAATCGATTACATTGCTTCGCTATGCGAAAACACAAATCCAGACCACAGATACGTATCTGAAATACTGTTGGCCTCAGGTCTCCTACTCAGAGATCTGAGTTCTGAATTGTTGACATTTCAACTGCACACGTCCGGTCATCCGATTAACCCGGAGCTTTTCCTTGTACTGGAGCAGACGAAAGCGAGTAGTTTGCTTGCGAAAGAAGAAAGCACTGGAAAAGTTGCCTACCCGAAGCTAAATGCCGAGAAGTTTCACCGGAAACTCATCTTCGATGCTGTGAACGAGATCCTCGGTGTGAAACTAGGCTCCTCTACTGAGCTATGGTTTCAGCCCAGCACAGTCAATCTCGCGAAGAAAACCGTTGGCGCGCAAAAGCTTCTCAAAGAACTATGCTTCGAGATAGAGAAAATGCAAGCCAAGAATCATGATTGCAGTTTAGAAGAGGAGGATAGTCTGAAAAGCATGCTAATGGAAGATGTCATGCATGAGAGCTGGACCGAATTCAACCGCGATTTACCCGGGGTTGTGTTGGATGTTGAGAGACTGATATTCAAGGACTTGGTCGACGAGGTTGTGATCGGCGAATCGGTTGGCTTGCGAGTCAAGTCATCGGTGCGGCGGCGGAGGCAGTTTAGGAAGTAG 3171 0.4576 MAAKLLHSLADDNPDLQKQIGCMTGIFQLFDRHHVLAPRHKRISAGNPHFGDGSLETDSNNMLHQQTTMDMNFKKGVNEKQRTSTESSRPSFSSCSSSLSSLDCKAEAEATFDGIVFPETLSTISPHLARHTLDLRDVVKDSMYREPRGLSVKTTAKEEAAFHTMKHKDSPRPFRPSKAVDGCYGVGIDGKHSVPVDLNDSMRVLAKLREAPWYYGEMRPSHEVKDGKWHSISKDSPRFAYDRRETSRFSFESHDTIKSTPKIREFPRHSLDSREGTWRGHNAESKPSHHSSKAYSCTSTSNNKVSSPQQSSTIQSRPPSVVAKLMGLEALPDSALASYTQSSPGETYTAQDNGQFPISRDGFTWPLRVSSSPKISLKDPTSPRRKNADLVMKPISSARVPIEPAPWKQQDGNRSSQKTSSTATKAPARTPDSFTSVYSDIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLDNRKEEQAPNVARNQRDYEPKVINLIENSTSARHQNPQGNNALSSTIKGYDSARAFESPIVIMKPAKFVEKTRISASSVTPIGSQKLQSSGAYVNKNALSSTGEVKDQPSNTSHCNRDASTSAVDKKARNGKTMKQAQTQTRSQQFPRENSPSSVKHSRSVSPRMQQKKLELDKRARPPAPPVDSNKPRRLTGKKTAELGPPAGKIRPKGRNSRPGDEQMSEASTESRSLSCQGDDVSLKSDGITVDSKTDIEFTSSLRSAEIEDGQSPSLKAMKQLVSQTVQKSSERLDQDETVAELATVAPENPSPMSSPGKKTPEERKADNENQDLWNTADSLSFNSSGEMNRKKLQSIDHLVQKLRRLNSSHDEARIDYIASLCENTNPDHRYVSEILLASGLLLRDLSSELLTFQLHTSGHPINPELFLVLEQTKASSLLAKEESTGKVAYPKLNAEKFHRKLIFDAVNEILGVKLGSSTELWFQPSTVNLAKKTVGAQKLLKELCFEIEKMQAKNHDCSLEEEDSLKSMLMEDVMHESWTEFNRDLPGVVLDVERLIFKDLVDEVVIGESVGLRVKSSVRRRRQFRK* 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1935 1056 MobiDBLite consensus disorder prediction 574 592 - -
Ahy10g1935 1056 MobiDBLite consensus disorder prediction 250 318 - -
Ahy10g1935 1056 Pfam Domain of unknown function (DUF4378) 857 1033 IPR025486 -
Ahy10g1935 1056 MobiDBLite consensus disorder prediction 338 435 - -
Ahy10g1935 1056 MobiDBLite consensus disorder prediction 409 435 - -
Ahy10g1935 1056 PANTHER LONGIFOLIA PROTEIN 1 1053 IPR033334 GO:0051513
Ahy10g1935 1056 PANTHER LONGIFOLIA PROTEIN 1 1053 - -
Ahy10g1935 1056 Pfam DUF761-associated sequence motif 306 334 IPR032795 -
Ahy10g1935 1056 MobiDBLite consensus disorder prediction 250 288 - -
Ahy10g1935 1056 MobiDBLite consensus disorder prediction 574 719 - -
Ahy10g1935 1056 MobiDBLite consensus disorder prediction 774 800 - -
Ahy10g1935 1056 MobiDBLite consensus disorder prediction 637 653 - -
Ahy10g1935 1056 MobiDBLite consensus disorder prediction 338 358 - -
Ahy10g1935 1056 MobiDBLite consensus disorder prediction 690 719 - -
Ahy10g1935 1056 MobiDBLite consensus disorder prediction 77 97 - -
Ahy10g1935 1056 MobiDBLite consensus disorder prediction 83 97 - -
Ahy10g1935 1056 MobiDBLite consensus disorder prediction 606 634 - -
Ahy10g1935 1056 MobiDBLite consensus disorder prediction 289 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1935 Ahy-Chr10 105044416 105049192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1935 133 1050 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 45.351 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1935 - - gmx:100805643 1372.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2422 20 129484734 129489653 Ahy10g1935 10 105044416 105049192 hybridization
Ahy11g2031 11 129391115 129396526 Ahy10g1935 10 105044416 105049192 PCT
Ahy1g2888 1 109730515 109736180 Ahy10g1935 10 105044416 105049192 PCT
Ahy10g1935 10 105044416 105049192 Ahy11g2031 11 129391115 129396526 PCT
Ahy10g1935 10 105044416 105049192 Ahy1g2888 1 109730515 109736180 PCT