Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1927 ATGGAATTTGATAATGGTGACAAGCGGCGGCGAAGCGGCGAATTCCGAGAGCTCAAGGTGGTTACCTTGGCTGCTATATGCTTTATGATACTTTCTCAAGCAGATGCATTTGATCCATTGGATCCAACTGGGAATGTGACAATAAGATGGGATATCATGTCCTGGACAACAGATGGCTATATGGCCACTGTGACAGTGTTCAACTTTCAACAATACAGGACAATCATGAACCCTGGATGGACAATAGGGTGGACATGGGCAAAGAAAGAGATAATATGGACAATGATGGGAGCTCAAGCAACAGAACAAGGCGACTGTTCCAAGTTCAAGTTGAAGATCCCACACAGCTGCAAGAGGAACCCTCAGGTTGTTGACTTAATGCCTGGAGCACCTTTCAACATGCAGTTCAATAACTGCTGCAAAGGTGGTGTCTTAACTTCTTGGGGTCAGGACCCTTCCGGCGCTGTCTCGGCTTTTCAGATAGGTGTAGGCCTCTCTGGCACCTCTAACAAGACAGTTAAGCTTCCCAAGAACTTCAAGCTTCTCGGTCCAGGGCCAGGCTATTCCTGTGGCCCTGCTAAGCTTGTGCCTGCCACTGTCATCCCAACCGATGATCGTAGGAGAAAAGCTCAAGCTTTGATGTCTTGGAATGTGACATGCACTTATTCGCAGTTTCTAGCCTCCAAGAATCCAAGTTGTTGTGTTTCTTTGTCATCTTTCTATAGTGACAAAGTCACAGCTTGTCCAACCTGTGCTTGTGGTTGCCAAAATAATGATACCTGTGTCACGAAGGACTCAAAGTTACTACAAGAAGATGAGAGAGTAAAGACTAAGAAGAGTGATATGACACCAAAACCATTGCTACAATGCACACACCACCTTTGTCATGTGAGGGTGCATTGGCACATCAAAGACAACTACCAAGATTATTGGAGGGTCAAGATTGCCATCATCAACTTCGACTATCGACTCAATTACACTCTATGGAACCTTGTTATTCAACACCCCAATCTCAACAATGTCACACAAGTCTATAGCTTTGAATACATGCCACTTCTTCCCTATGAAGCCATAAATGACACAGGAATGTTCTATGGTTTGAAGTACTACAATGATCTATTGATGGAAAATGGGCCTAAAGGGAATGTGCAATCTGAGATTCTTATGAAGAAGGACAAGAACACATTCACACTCAAGCATGGATGGGCATTTCCAAGGAGGGTCTACTTCAATGGTGAAGAATGCATGCTGCCACCTCCTGATTCATACCCTTTCTTGCCAAACTCTGCTCATAGACTACTGATTAGTGCTTCGTCGATAGTAGCCAGCACCATTTTCGCATCGTTTTTCATTTGGTTGTGA 1362 0.4442 MEFDNGDKRRRSGEFRELKVVTLAAICFMILSQADAFDPLDPTGNVTIRWDIMSWTTDGYMATVTVFNFQQYRTIMNPGWTIGWTWAKKEIIWTMMGAQATEQGDCSKFKLKIPHSCKRNPQVVDLMPGAPFNMQFNNCCKGGVLTSWGQDPSGAVSAFQIGVGLSGTSNKTVKLPKNFKLLGPGPGYSCGPAKLVPATVIPTDDRRRKAQALMSWNVTCTYSQFLASKNPSCCVSLSSFYSDKVTACPTCACGCQNNDTCVTKDSKLLQEDERVKTKKSDMTPKPLLQCTHHLCHVRVHWHIKDNYQDYWRVKIAIINFDYRLNYTLWNLVIQHPNLNNVTQVYSFEYMPLLPYEAINDTGMFYGLKYYNDLLMENGPKGNVQSEILMKKDKNTFTLKHGWAFPRRVYFNGEECMLPPPDSYPFLPNSAHRLLISASSIVASTIFASFFIWL* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1927 453 PIRSF COBRA 13 453 IPR006918 GO:0010215|GO:0031225
Ahy10g1927 453 PANTHER PROTEIN COBRA 1 453 IPR006918 GO:0010215|GO:0031225
Ahy10g1927 453 PANTHER COBRA-LIKE PROTEIN 1 453 - -
Ahy10g1927 453 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1927 Ahy-Chr10 104879491 104881974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1927 48 436 COBRA Gene Family AT5G60920 63.104 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1927 - - gmx:100813134 808.135