Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1923 ATGGAGTCTTGGAGTTATGTTTCTGAAGAGAAGGGTTATGTCTCAAACGATGCAATTTCCCCTCCCAACACTCTTGGGAGGAACAGCAAAGGTTCCTTCTTGGGTTGGGAACTGAAAACCCCAGGTGGTTTTTCCCTTGAGAATCAAGGTTTTGAGGAATTGGGGTTCCCAGGGATGAAACAATTGCCCCAAGATCCTAATCCAATTGGTAGTGTTCATAGCAGAAAGATTGATAATGACCCTGCTATGGCTACCCCAAACGCATTCTCTTCAAGAGATGATTTCAATTCCAAGATTTCAGACTCTTTGGGGGACTCTAATGGTGGTGGCCGTGATTCACTTATTGACTTGAAGCTTGGTAGGTTTCCTGATCATGGTGATGTTGGTGTGGCGGCGCCAGCATTCTCCAAAGGGGCCCCTATTTTGTCGTCATCGGAGTCGTCCACGCCGCCGAAGAGGGTTCGAGCTTCTGGGATTCACTCTCAGACAGCATACTGCCAGGTCTATGGATGTAACAAGGATCTGAGTGGTTGCAAGGACTACCATAAGAGGCACAAAGTTTGTGAGGTTCATTCCAAGACTTCCAAAGTTATTGTCAATGGTATTGAACAAAGGTTTTGTCAGCAATGTAGTAGGTTTCATTTGCTGGCTGAATTTGATGATGGTAAGCGTAGCTGTCGTAAACGCCTTGCAGGCCATAACGAGCGGCGGAGAAAACCACAAGTTGGTATTCACTCTGGAAAGCCTGGGAGGTTGCTTCAGCCATATGGTGAAAGCAGATTCCAGGGAAACATGCTAACATCAGCATCTTTCATCTGCCAAGAGATACTCCCGGCTGGGGCCTTATCTTCTGAGAGATATGGAACAAGTGACTGGTGGAGACCTATAAAAACCGAAGGCGGCACTGGTTTTAGGCATCTTTCTTCTGTTCCTATCTCTAATGGACACCCTCAGTCACGACCTCTGTTTCCTTCATATAATGAGAAGCAATTTCCCTTTCTTCATGAAAATAATGATGCTACATCTGCTGGGGGTAGCATCTTCTGTGAAAATAATAGCTCATATCTACCTGCCATAGGAGGGCCGAACTCGGGGTCACAATCATTATTCCAGGACACGTCCATAGGAGGTGAGGACTTCAATGTTTTCGATACAGAATCGGCTGTTCAAGGACTATCGGGAATTTCAGACTCTGGTTGTGCTCTCTCTCTTCTGTCATCTCAATCACAAAACTCTTCAAGCCAGTCATCTGGAATTCCCATGGCTCGCTCAATGGTCATTCGGAGCAGCCATAGCAGTAGCCATTATGCCATGAGCCAGGTCTCTGAAAAGATGATAGGAATAACTTCGCAAGCTTCGAGTGGAGTCTCCGATAGGTTTCCATCTGAGTTGAATCCTGCAGATGGAAGTCCTCTTAGCTCTGTGCTGATATCTGACACCAATGACATTGTCAACTTTGAAATGGCAGATGGAATATTCCATGGTTCAGATTTTGTGAATGTGAAAGATCGTCTCTCATGTGATGATGTCCCGACTATCGACTTGCTTCAACTGTCTTCGCAGCTTCAGCGAGTTGAGAGTGAGAGACAATCCTTGCAGGTGAAGCAAGAAAATGATTCATCAGTCTCTCTCCGGATTACTTAA 1644 0.4574 MESWSYVSEEKGYVSNDAISPPNTLGRNSKGSFLGWELKTPGGFSLENQGFEELGFPGMKQLPQDPNPIGSVHSRKIDNDPAMATPNAFSSRDDFNSKISDSLGDSNGGGRDSLIDLKLGRFPDHGDVGVAAPAFSKGAPILSSSESSTPPKRVRASGIHSQTAYCQVYGCNKDLSGCKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQVGIHSGKPGRLLQPYGESRFQGNMLTSASFICQEILPAGALSSERYGTSDWWRPIKTEGGTGFRHLSSVPISNGHPQSRPLFPSYNEKQFPFLHENNDATSAGGSIFCENNSSYLPAIGGPNSGSQSLFQDTSIGGEDFNVFDTESAVQGLSGISDSGCALSLLSSQSQNSSSQSSGIPMARSMVIRSSHSSSHYAMSQVSEKMIGITSQASSGVSDRFPSELNPADGSPLSSVLISDTNDIVNFEMADGIFHGSDFVNVKDRLSCDDVPTIDLLQLSSQLQRVESERQSLQVKQENDSSVSLRIT* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1923 547 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 37 547 IPR044817 GO:0003677
Ahy10g1923 547 MobiDBLite consensus disorder prediction 76 107 - -
Ahy10g1923 547 SUPERFAMILY SBT domain 164 244 IPR036893 GO:0003677|GO:0005634
Ahy10g1923 547 PANTHER 1 PROTEIN, PUTATIVE-RELATED 37 547 - -
Ahy10g1923 547 Pfam SBP domain 166 239 IPR004333 GO:0003677
Ahy10g1923 547 ProSiteProfiles Zinc finger SBP-type profile. 163 240 IPR004333 GO:0003677
Ahy10g1923 547 MobiDBLite consensus disorder prediction 84 107 - -
Ahy10g1923 547 Coils Coil 515 535 - -
Ahy10g1923 547 Gene3D - 157 227 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1923 Ahy-Chr10 104823330 104827647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1923 115 282 SBP-box Gene Family AT1G69170 52.941 6.25e-49 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Ahy10g1923 SBP 5.60E-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1923 - - gmx:100777766 800.816