Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1897 ATGAACCACTCTTCAGCAGATCATGATCGGGATCAGTACCTAAAGAAGCGAAAATCGAGTGCTGATTCCTCGTCAAGCATGAGGAAATCCAGCGCAAGGAGAAGATTCAGCAGCAGCAAGAATTCGAACAACAACGACGGAGGCGGAGGCGGAGGCGGAGGCGTGTCGACGACGCTGAAGCTGTACGACGATCCATGGAAAATAAAGAAGACGTTAACGGACAGCGACCTCGGGATCCTGAGCAGGCTGTTGCTGGCAGCTGATTTGGTGAAGAAGCAGATCCTTCCGATGCTGGGCGGCGATCACGCTCGGGCGGCGGAGACGGAAGAAGGAACCCCGGTGAGAGTGTGGGACATGGACACCAGATCCATGCACCACTTGGTCCTGAAGCGTTGGTCATCTTCCAAAAGCTATGTTCTTATTGGAAAATGGAATCAAGATTTCGTCAGAAGACGGGACCTCAAGAAAGGCGATGAGATTGGCTTCCACTGGGATCCCTATAACTGCGCCTTCAACTTCTGCGTTCTTACACGCGCCTCCTCCTCCTCCTCCACCTGA 558 0.5323 MNHSSADHDRDQYLKKRKSSADSSSSMRKSSARRRFSSSKNSNNNDGGGGGGGGVSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLGGDHARAAETEEGTPVRVWDMDTRSMHHLVLKRWSSSKSYVLIGKWNQDFVRRRDLKKGDEIGFHWDPYNCAFNFCVLTRASSSSST* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1897 185 MobiDBLite consensus disorder prediction 24 51 - -
Ahy10g1897 185 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 18 179 - -
Ahy10g1897 185 Gene3D - 65 183 IPR015300 -
Ahy10g1897 185 CDD B3_DNA 66 176 IPR003340 GO:0003677
Ahy10g1897 185 MobiDBLite consensus disorder prediction 1 54 - -
Ahy10g1897 185 MobiDBLite consensus disorder prediction 1 23 - -
Ahy10g1897 185 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 18 179 - -
Ahy10g1897 185 SUPERFAMILY DNA-binding pseudobarrel domain 64 175 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1897 Ahy-Chr10 103965359 103966886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1897 48 169 RAV Transcription Factor Family AT1G51120 35.200 3.64e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1897 - - pvu:PHAVU_009G204600g 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2377 20 128050250 128051255 Ahy10g1897 10 103965359 103966886 hybridization