Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1892 ATGGCTCCTCCGTGGGTCCAAGAGCTCCATCTGCCTCATCTCACCGTTCCAGTTACCATTGACGCCATGTACCCTGTCATGCCATCGCACCCTATACCCGTCCAATATGGAGACACCCTCTACCTCTCCAACCTCGACGACATGATCGGAGCTCGTGTCTTCACACCCACCGTGTACTTTTACCAACAAACTACCACCAACAGTTGTGCCAATTCACAAAAACCCATAGTCAAAACACTTCAAGATGCCCTTGCTGATGTCTTGGTCCCTTACTACCCTCTCTCAGGGAGGCTAAGGGAGACCAGCAACGGGAAATTAGAAGTGTTCTTTGGTCCAAGCCAAGGTGCACTCATGGTTCAGGCACATTCCGATGTGGCTTTATCCGAATTAGGAGACCTCACTGCACCAAACCCAACTTGGGAGCCATTAATCTTCAAGTTCCCTAATGAAGAGCCATACAAAGTCCTTGACATGCCGCTTGTAATAGCACAAATCACAATCTTCCGCTGCGGCGGATTCAGCCTTGGGTTGCGACTCTGTCATTGCATCTGCGACGGCCTAGGAGCCATGCAGTTTCTAGGCGCATGGGCTGCAACTGCAAAGGCTAGGACTTTGGTAACAAATCCAAGGCCAATTTGGGATAGAGAGGTTTTCAAACCCCGTGACCCGCCTCATATACAATTCCCCCACATGGAGTTTAGGAAAATTCAAGAAGGCTCAAATCTCACAATGTCGTTATGGGAAACTAAACCGTTACAGAAGTGCTATCGCATCACGCGGGAGTTCCAAAACCTTATAAAATCCCTTGCCATGCCACGTGACGGTTATGGCTGCACAACATTCGACGCAATGGCTGCACACGTGTGGAGGTCGTGGGTCAAGTCGTGGGTCGTGTCAAGTCATGCAAGACAAAAGCTCCGGAATCCACCCTTGAAGGAAGGGTTCTACGGCAATGTAGTGTGTGTACCTTGCACAACAAGCAAAGTTTCAGAGCTTGTGAACCCTGAACGGCTTTCGGAGACAACGAGGTTGGTTCGAGAAGCAAGGCTAAGTGTGTCGGAGGAATATTTGAGGTCAACGGTGGATTTCGTTGACTTGGAGAGGCCAAAGCAACTAGAGTTTGGAGGGAAGCTAACAATAACTCAGTGGACAAGGTTTTCAATATACAAGTGTGCAGATTTTGGGTGGGGAAGGCCACTATATGCTGGTCCTATAGACTTGACTCCTACGCCTCAAGTTTGTGTTTTTTTACCCGAAGGACAAGATGGTAGTGGTGGTGATTCTTGTTCCGGTGGTGGTTCTATGATTGTGTGTATATGTTTGCCAGAATCTGCTGCTCATAAGTTTACTCAAGCATTCATGTTGTTGGATAACTCAAAATTCACACATTAG 1392 0.4813 MAPPWVQELHLPHLTVPVTIDAMYPVMPSHPIPVQYGDTLYLSNLDDMIGARVFTPTVYFYQQTTTNSCANSQKPIVKTLQDALADVLVPYYPLSGRLRETSNGKLEVFFGPSQGALMVQAHSDVALSELGDLTAPNPTWEPLIFKFPNEEPYKVLDMPLVIAQITIFRCGGFSLGLRLCHCICDGLGAMQFLGAWAATAKARTLVTNPRPIWDREVFKPRDPPHIQFPHMEFRKIQEGSNLTMSLWETKPLQKCYRITREFQNLIKSLAMPRDGYGCTTFDAMAAHVWRSWVKSWVVSSHARQKLRNPPLKEGFYGNVVCVPCTTSKVSELVNPERLSETTRLVREARLSVSEEYLRSTVDFVDLERPKQLEFGGKLTITQWTRFSIYKCADFGWGRPLYAGPIDLTPTPQVCVFLPEGQDGSGGDSCSGGGSMIVCICLPESAAHKFTQAFMLLDNSKFTH* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1892 463 Gene3D - 243 455 IPR023213 -
Ahy10g1892 463 Gene3D - 16 235 IPR023213 -
Ahy10g1892 463 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 457 - -
Ahy10g1892 463 PANTHER F21B7.2 12 457 - -
Ahy10g1892 463 Pfam Transferase family 17 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1892 Ahy-Chr10 103810787 103812616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1892 26 455 Monolignol Biosynthesis Gene Families AT5G48930 27.974 1.33e-46 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1892 K15400 - gmx:100802814 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2369 20 127909152 127910928 Ahy10g1892 10 103810787 103812616 hybridization