Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1882 ATGGATTCGCAGGTGCATTTCACTGTTGGAGACGATGACTCGGGCGGTCTTAGTGAGGATGAGTATTTCCGCATTTCTTCTCCGATTGGGGATGACGAGGATGACTCCTTTGAGAGTGACTCCGAGACGGCTGAAACGGGTGACGAAACCCACGGGAACGGGGTCAGGCCAAGCCAGGAGACATGTGAGGCTGATGCTCCCGGTTTTAGGTCGACGGAGGATTTCTTGGACAAAGTGTTTAGTACCGAGGAAGATGCTTACGCGGCATACAAACAGTTTGCCAGACTCAGGGGGTTCGGTGTAAGGAAGGGTGACGTGGCTCGAATGAACGGCCTTTTGGTTAGACGAGACTTCTTTTGTCATCGTCAAGGTACAAGGCATGAGAAACAATACGATCGTCCAGAAAGAGTGAGGGAGGAGAAGCTGGAGAGTCGCACGGGTTGTTCAGCGAAGCTGAAAATTTACTATGACCTGCAAGATCAGGTTTGGAAAGTCCGGAGAATAGACGACAACCATAACCACCCTCTTGCTACAACCATGTTTAGTCATCTTCTTCCGAGTCATCGGAATCTGAGTGACGGTGACAAAGCTCAAGTTGATAGTCTAAAAAAGTTTGGCATTGCGACATCAAAGATAATGGCGTACATGGCCGGGCAGTCAGGGGGTTACGGGATGCTTCGGTTTACGAAGAGGGATTTGTACAATTACGTTCACAGCCAAAGAATAGCACAAATTATCAATGGTGACGCTGCAGCAGCAATAAGTTATTTGGAAGGCAAGGCCAATACGGACATGATGACTGTTGCCAGATACACCAAAACAGCAGAGAATCAACTTGGTAGCCTATTCTGGGCGGATGGGCAGATGATGGCGGATTACCAGTTGTTCGGTAACGTCCTTGCATTTGATGCAACATACAGGTCCAACAAGTACAAGAAGCCTCTGGTGGTATTCTCCGGATCAAATCATCACAAGCAGATAGCAATTTTCGGCTTTGCATTGCTGGAGGACGAGGAGGTCCGTACATATAAATGGGTATTGCTGAACATTTTTGATGTCATAGAAAACAAGAAGCCTTCCGTTGTGGTCACTGACGGGGATAAAGCAATGCGGGCAGCGATCGCCGATGTGCTACCTTTAGCCAGGCATCGCCTATGCGGGTGGCATTTGGAAAAAAACTGTGTCTTAAGGGTGAAAGGAGCCTGA 1206 0.4842 MDSQVHFTVGDDDSGGLSEDEYFRISSPIGDDEDDSFESDSETAETGDETHGNGVRPSQETCEADAPGFRSTEDFLDKVFSTEEDAYAAYKQFARLRGFGVRKGDVARMNGLLVRRDFFCHRQGTRHEKQYDRPERVREEKLESRTGCSAKLKIYYDLQDQVWKVRRIDDNHNHPLATTMFSHLLPSHRNLSDGDKAQVDSLKKFGIATSKIMAYMAGQSGGYGMLRFTKRDLYNYVHSQRIAQIINGDAAAAISYLEGKANTDMMTVARYTKTAENQLGSLFWADGQMMADYQLFGNVLAFDATYRSNKYKKPLVVFSGSNHHKQIAIFGFALLEDEEVRTYKWVLLNIFDVIENKKPSVVVTDGDKAMRAAIADVLPLARHRLCGWHLEKNCVLRVKGA* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1882 401 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 74 395 IPR031052 GO:0006355
Ahy10g1882 401 MobiDBLite consensus disorder prediction 1 67 - -
Ahy10g1882 401 Pfam FAR1 DNA-binding domain 90 177 IPR004330 -
Ahy10g1882 401 Pfam MULE transposase domain 299 393 IPR018289 -
Ahy10g1882 401 PANTHER OS02G0262500 PROTEIN 74 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1882 Ahy-Chr10 103588887 103590092 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy10g1882 MULE 6.90E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1882 - - ahf:112717862 796.578