Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1862 ATGGCACATGAAAGAAAACACTATTGCTTCATCTTCTTCTTCCTCTTCCTTCTCAGTATCGTGTTTGCCCCGCTGTCACGGGCAGACAACGATACTCAAATTCTTTTGCGGTTCAAGAACTCGTTGTCCGATGCCGGCGCCTTACAAAATTGGGACGAGTCAATCAATATTTGCAGCTGGACCGGCTTGTTATGCAAAGATGACAAACTTCATGGACTAAAGCTAGAAAACATGGGATTAAGTGGCACCATTGACATAGACATTCTTTCCGAATTGTCTATTTTGAATAGCTTTAGTGTGATTAACAACAACTTTGAGGGTCCAATGCCGGAGTTCAAGAAGCTTGAGAGGCTAAGGGGATTGTTTCTTTCCAATAACAAATTCTCCGGCCAGATTCACGACGATGCATTCGTCGGCATGAGGAGGCTGAAGAGGGTATTCTTGGCGGAAAACGAGTTCAGCGGCCATATTCCTAGCTCTCTTGCTCAATTGCCAAGGCTTTTGGACGTGGACTTGCATGGAAATAGATTTGATGGTACCATACCTGAATTTGAGAATAGCGATTTTAGGGTTTTTGATTTATCAAACAATCAATTGGAGGGTTCAATTCCAAAAAGCTTGAGCAATGTGGATCCAAGTGCATTTGCTGGTAACAAAAGACTATGTGGAAAACCTCTAAGCAACCCTTGCAGCAATAATGAACAACCCACCCCTCAAAATGACAACAAAACTAACAAACATCGCACACTAATAATTATAATTATCATAGTGGTAATTGTGGTTATCTTGGTTCTAATCCTAGCACTCTTCATAATCATAAAGCGCAGAAGAAAAGCCAAAAACCCTAATCAGCTGGTAGAGGCTGCAAATGCATCAAAACCTCAGAGTAGTGTTGCAGTTTCAAGTGATGAGGCCAAGATGGCGACATCCATGGAGGCAAGGGCATCCATTGAGCCAAGTATATCAATAGAAACAAAATCCATAGACGTGGCTGCGACTGAGGCTGAGGCTGCGACAGCCCTGTTATCCATTCAGAGTGTTGAAGATGGTGGCGGCGGCCACGGAGGAGGAGGAGGAGGAGGAGAAGACTTTAACTTTGTGAGGGAAGATAGAGAGGTTTTTGATCTGCAATACCTGCTGAGGGCCTCGGCCGAGGTACTCGGCAGTGGAAGCTTTGGATCAACCTACAAAGCTATGATTCATAGTGGTCAAGTTGTGGTGGTGAAGAGGTTCAAGAACATGAACAAGCTTGGAAAACAAGAATTCTTTGAGCACATGAGAAGGCTTGGGAGGTTGACACACCCTAATGTGCTCCCTCTTGTTGCATTCTACTATGGAAAAGAAGAGAAGCTTCTGGTCTATGACTTTGTTCAAAATGGGAGTTTGGCTAGTCATCTTCATGGTAAACGAAGTTTAGCGTTAGATTGGCCAACTCGTTTGAAGATCATAAAAGGAGTAGCAAGAGGCTTGGCATACTTATACAAGGAATTTCCAGACCAAAAACTGCCCCATGGACACCTCAAATCCTCAAATGTTTTGTTAGATCATGCATACAAGCCTCTTTTAACAGAATACCAACTCGTGCCAGCAATAAACAAAAGCCACGCCCAGCAATTCATGGCAGCGTTTAAGTCTCCCGAGGCAAGCCAGCACGACAGTCCTGGCGACAAGACTGACGTGTGGTGCCTCGGGATCCTTATACTGGAGTTGCTGACAGGAAGGTTTCCTGCAGATTACGTGAGGCACGGAAAGGGTGCGAGCGAGGAACTAGAGACATGGGTGAAATCTATTGTGAGTGGAGAGGTGATTGATAAGGACATGGTTGGAGGAAGCAATGGTCAAGGGGAGATGTTGAAGATGTTGAGGGTTGGGATGGGGTGTTGTGAGTGGAATGAGGGGAGTAGGTTGGAATGGAAGGAAGCTTTAGCCATGATTGAGGAGGTGAAAGAGAAAGATAACATGGAAGATGAATCTTCTGGTTTTAGTGAGTGGGACTTGTCCTTTTATTCGGAAACTCTTTAG 2022 0.4461 MAHERKHYCFIFFFLFLLSIVFAPLSRADNDTQILLRFKNSLSDAGALQNWDESINICSWTGLLCKDDKLHGLKLENMGLSGTIDIDILSELSILNSFSVINNNFEGPMPEFKKLERLRGLFLSNNKFSGQIHDDAFVGMRRLKRVFLAENEFSGHIPSSLAQLPRLLDVDLHGNRFDGTIPEFENSDFRVFDLSNNQLEGSIPKSLSNVDPSAFAGNKRLCGKPLSNPCSNNEQPTPQNDNKTNKHRTLIIIIIIVVIVVILVLILALFIIIKRRRKAKNPNQLVEAANASKPQSSVAVSSDEAKMATSMEARASIEPSISIETKSIDVAATEAEAATALLSIQSVEDGGGGHGGGGGGGEDFNFVREDREVFDLQYLLRASAEVLGSGSFGSTYKAMIHSGQVVVVKRFKNMNKLGKQEFFEHMRRLGRLTHPNVLPLVAFYYGKEEKLLVYDFVQNGSLASHLHGKRSLALDWPTRLKIIKGVARGLAYLYKEFPDQKLPHGHLKSSNVLLDHAYKPLLTEYQLVPAINKSHAQQFMAAFKSPEASQHDSPGDKTDVWCLGILILELLTGRFPADYVRHGKGASEELETWVKSIVSGEVIDKDMVGGSNGQGEMLKMLRVGMGCCEWNEGSRLEWKEALAMIEEVKEKDNMEDESSGFSEWDLSFYSETL* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1862 673 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 658 - -
Ahy10g1862 673 ProSitePatterns Protein kinases ATP-binding region signature. 387 409 IPR017441 GO:0005524
Ahy10g1862 673 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Ahy10g1862 673 Gene3D Ribonuclease Inhibitor 137 234 IPR032675 -
Ahy10g1862 673 Gene3D Phosphorylase Kinase; domain 1 367 456 - -
Ahy10g1862 673 SUPERFAMILY L domain-like 30 210 - -
Ahy10g1862 673 Pfam Protein kinase domain 384 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g1862 673 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
Ahy10g1862 673 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 10 658 - -
Ahy10g1862 673 SUPERFAMILY Protein kinase-like (PK-like) 385 648 IPR011009 -
Ahy10g1862 673 Gene3D Ribonuclease Inhibitor 29 136 IPR032675 -
Ahy10g1862 673 ProSiteProfiles Protein kinase domain profile. 381 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g1862 673 Gene3D Transferase(Phosphotransferase) domain 1 457 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1862 Ahy-Chr10 103046566 103051727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1862 11 648 Receptor kinase-like Gene Family AT4G31250 43.119 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy10g1862 Pkinase 1.80E-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1862 - - adu:107470884 1278.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2333 20 126905381 126911420 Ahy10g1862 10 103046566 103051727 hybridization