Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1848 ATGGATCCACCAAAGAAATCTAACAAGATCAAGGACATTGTTAGGCTTCAACAGATCCTCAAGAAATGGAGAAGGATTGCCAACTCTTCAAAATCAAGTGACAACAACAACAACAACAACAACAACAACAACAACAACAACAATCATAGCGGCAGCACCAGCAGTAAAAGCATTAAGTTTCTGAAAAGGACACTTTCTTTGTCCGAGCGTGACAAAGGATCGTCAAGCAATGCGGTTCCAAAAGGCTACTTAGCTGTTTGCGTCGGACTAGAGCTCAAGAGATTTGTCATACCAACTGTATATTTGGGTCACCAAGCCTTTCACATGTTGCTAAGAGAAGCTGAAGAAGAGTTCGGGTTTGAGCAGACCGGCGTTCTGAGGATTCCTTGTGAAGTATCTGTGTTTGAGAGTGTCCTGAAGATGGTGGAGGAAAAGGACAAGTTTTCGGCTCACAATTGCGGATTATTCAGTGTAGAAAAGATGATGATGGGGTACTGCTCCTTCAATCAGCTTACTTATTCACATCATCCTCAAAGTCCTATGTGCAGATAG 552 0.4257 MDPPKKSNKIKDIVRLQQILKKWRRIANSSKSSDNNNNNNNNNNNNNNHSGSTSSKSIKFLKRTLSLSERDKGSSSNAVPKGYLAVCVGLELKRFVIPTVYLGHQAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESVLKMVEEKDKFSAHNCGLFSVEKMMMGYCSFNQLTYSHHPQSPMCR* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1848 183 MobiDBLite consensus disorder prediction 29 55 - -
Ahy10g1848 183 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 183 IPR003676 GO:0009733
Ahy10g1848 183 PANTHER OSJNBA0060N03.10 PROTEIN 6 183 - -
Ahy10g1848 183 Pfam Auxin responsive protein 28 142 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1848 Ahy-Chr10 102825975 102827436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1848 5 183 Calmodulin-binding Proteins AT4G31320 51.562 4.85e-57 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1848 K14488 - gmx:100527662 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2317 20 126671297 126672569 Ahy10g1848 10 102825975 102827436 hybridization
Ahy10g1848 10 102825975 102827436 Ahy16g3010 16 145173731 145174555 PCT