Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1826 ATGCCTATGCGTTATGGTTGTTTTCGAAAGGCATTTTGGGCGACGATGCTAATACCCTATGTGTTCTTCCTTCTGGGGTTTTCACTTATAAGCATAGGAGGTGGACCTAAATGGAAAGATTCTAATTCTTCTTCTCAGTTCATCATTATTGGTTCCGGTTATTTCATATTTGTTGTTGCCTACATCCTATTTATTATAGCGGACAAGTTTTTGCCTATATATTTGAGGGATAGTAGCTCATCGGAGAATAATACTATTGAGATCACAAGAAATATGAGAGTGGTTCCTTGGTTGGATGAAGATGGACATTTTATGATAACGATTCAATCTTTTGATTCCGAAGAGACACAAGAACTCACGGAGTTGCCTTTTAGTCGGAGTATGCGGATGGCTAGACTTGCTTTGAAGGCATTGCCGCCGGTTAAGAGCTTCGCTAAGGAGGAGGAGGACGAGGACGGATTAGTCGACCGGAGAAACAATTTTTGTCCTATTTGTATTGAAGAGTTTAAGGATGGAGAGTTAATTCAACCTTTTGGAGTGTGTGTTCATGAGTTTCATTCGGCTTGTATAAACTCTTGGTTACACTCTGGAAAAACTAGTTGTCCGCTTTGTCGTGAAGATTTAGCTACTTTTATGAATTGA 642 0.3972 MPMRYGCFRKAFWATMLIPYVFFLLGFSLISIGGGPKWKDSNSSSQFIIIGSGYFIFVVAYILFIIADKFLPIYLRDSSSSENNTIEITRNMRVVPWLDEDGHFMITIQSFDSEETQELTELPFSRSMRMARLALKALPPVKSFAKEEEDEDGLVDRRNNFCPICIEEFKDGELIQPFGVCVHEFHSACINSWLHSGKTSCPLCREDLATFMN* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1826 213 SUPERFAMILY RING/U-box 134 210 - -
Ahy10g1826 213 ProSiteProfiles Zinc finger RING-type profile. 162 205 IPR001841 -
Ahy10g1826 213 PANTHER OS06G0666500 PROTEIN 123 209 - -
Ahy10g1826 213 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 123 209 - -
Ahy10g1826 213 Pfam Ring finger domain 162 205 IPR001841 -
Ahy10g1826 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 210 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1826 Ahy-Chr10 102021692 102022515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1826 153 208 C3H Transcription Factor Family AT3G10910 42.857 6.44e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1826 - - adu:107470824 432.565