Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1810 ATGGAAGGTGACAGGGAAATCATTGCTGCACCAAATGGGGTAGTTGATGGTGTTCAGAGAATTAGAGCATTGCACGGGAGGACGACTGGTCCTACAAGGCGTTCTACAAAAGGACAATGGACTGCCGAAGAGGATGAGATTTTGCGTAAAGCTGTTCAGCGTTTTAAAGGAAAGAATTGGAAAAAAATAGCTGAGTGTTTCAAGGATAGAACTGATGTCCAGTGCCTGCATAGATGGCAGAAAGTCCTAAATCCAGATCTTGTCAAAGGTCCATGGTCTAAAGAGGAAGATGAAATAATTATCGAATTAGTGAATCAATATGGGCCTAAAAAGTGGTCTACTATTGCTCAGAGTTTACCTGGACGTATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTTCAATAAACAAGGAAGCATGGACACAGGAAGAGGAGTTGGCTCTAATACGTGCTCATCAAATTTATGGAAACAAATGGGCAGAACTAACAAAGTTCTTACCTGGAAGGACAGACAATGCCATAAAAAACCACTGGAACAGTTCTGTAAAAAAGAAATTGGATTCTTACTTGGCGTCAGGCTTGATTACTCCGTTATCAAATGTACCGCTTGTTGGAAATCCCAATCAACCCATGGCCTCAACCTCTTCAAAGTTGCAGTCTAGTGGAGATGAAGCTGGTCATAGGGGGACTGAAGGAGAGGAAGTTTCACAATGTAGCCAGGAGTCAGCTAATGCCACACAGTTTCCATCTGCCAAAGAGATGAGCAATGTTTTACAATCCAGAGAGGAATACAGAGGAAACGAAGAATATGGTCCTGGAAAGGGGTATAGTCCTAGTCAAGCTTCTTGTTCAGAGCCATATTATGTTTCTCTGGACGACATCACTATATCTATCCCAGAGATGCCTCGCCAAGTGACTTCCTCCTCTCAATTCATTGAGCAAAATTACTCACAAGAACCTGTAAATCCAGCAGCCGGGGATTGCCATCATAATTTGCTTTCCTTACCCAATATTTCCTCACTGGGTTTTGTGCAGGAATCCACACAGTTGCAAAATGAGTGTATGGTTCATGCTCGCAGTGAAGGCCATGATATGGCCGATGCTCCATTTCAGACTTCTGTAGAGCTAGCTGTTTCGACATCCATAAGACCTACTGCTATGGACTCGCTACGAGAGCACATGTTGATATCTGATGATGAATGTTGCAGAGTTTTATTTTCAGAGGCAATAAGTGATGACGGCCCTTCTTCTGTGGACTATAATAAAGGTGTACATATGGTTGACTTGTCTGGGTGCACTTCCATTCTTCACGAGTCGTCTTTGCCATCTGCCTCAGTACCTACTGCTAATGATGGTAGATTGCAGTGTACTTCAGAAACAAAACATTTACTTCAGCCAGAGGATCAGCAGTTTGTCTCCAGAGCACACGATGTTTATGCTAATGACTTAGCCAGTGCTCCTTCTATTTATGGTATATGTAGTGCAGAAATGCAAGAGGAATCTGATATAGTGAATGACACTTCAAAATTGATCCCTGTAAATAGTTTTGGCTGTGGACCAGATACTAAAAAAACTGACCATTCTATCATGGAAAAGCCGAATGGGCATGCAGAACAGGAAGACACAGGAGCTTTATGTTATGAACCTCCCCGTTTTCCTAGTTCGGATATTCCTTTCTTCAGCTGTGATCTTGTACAATCTGGCAGTGATATGCAGCAAGAATTTAGTCCCCTTGGTATTCGCCAGTTTATGATGTCCTCTATGAACTGTCTGACTCCCTTTAGGTTATGGGACTCACCTTGTCATGATAAAAGCCCGGATGCTTTGTTGAAAAGTGCTGCTAAAACCTTCACAGGTACACCATCAATATTAAAGAAACGACACCGTGATTTTTTGTCTCCTCTATCAGATAAGAGACTTGACAAGAAACTTGAGACATCCAACTTGATAAAAAACTTTTCCCGACTGGATGTCATGTTTGATGACAGTGAGACTCAGAAAGCAGATCCACTTTCTCCATCTACATTGAAGGAAAATCTTGGGCCATCTTCTGAAATGGAACAAGTAGACAAGAAAAATGAACCACCAATGCTGGACGACAATAAATCAGTAAATGATAAAGATGCTAGTGATTTTCTGGATAAGACTGAGCAACGAGCTCTCGATGTTGATTCTAAGAGGAACGATGATGTTAACACTACCGTTGAGATTGTGCAACAACATTCTGGAGTCTTGGTTGACCGTGATCCGAATAACTTGCTGTTGAATTCTCCTAAGCAAGTTGGTGTGAAATCAGACATAGTATTAAGTGCTAGAACAAATAAACATGCATGCTCAAGTGTTAAGTCTCCTTGTATTCGTGTGAAGGAGAATGAGAGAGTTTCAATTGCTCTTACATGTGTACAATCTGTTTGTTCAACAGCCGCCGTAGAAAACTTGGGTGATCAAACAGGAAAAGATGGAGGGTTTGAAACATCCAGCATATTTAATGAAACACCTTTTAGGAGAAGCCTTGAATCACCTTCACCGTGGAAATCTCCTTGGTTCATAAATACATTTTTGTCTAGCCCCAGGATTGATACCGAAATTACAATTGAGGATTTTGGGATATTCATGAGCCCATGTGATAGAAGCTATGATGCAATTGGGTTGATGAAACAGGTTAGCGAACAAACTGCTGCTCAATATGCCAATGCTCATGAAATTTTGGAAAATGAAACTCCTAAGGCGTTACCAAAAGATGCATCTAGAAACAACAGGGATGAGAACAAGGAAAATAATGATCCACAGAAGCAGCATGTGAACCATTCTCAATTGACTTCAAAAGCTTTGGTGGAGCGACGCATACTTGACTTCAGTGAATGCGGATCACCAGGCAAGGGTGACAGCAGCAAATCATCAAGCATGATCTTAGAAAGTCCGTCGTCATATTTGAAGGATTGTAGATAG 2961 0.4151 MEGDREIIAAPNGVVDGVQRIRALHGRTTGPTRRSTKGQWTAEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPDLVKGPWSKEEDEIIIELVNQYGPKKWSTIAQSLPGRIGKQCRERWHNHLNPSINKEAWTQEEELALIRAHQIYGNKWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLITPLSNVPLVGNPNQPMASTSSKLQSSGDEAGHRGTEGEEVSQCSQESANATQFPSAKEMSNVLQSREEYRGNEEYGPGKGYSPSQASCSEPYYVSLDDITISIPEMPRQVTSSSQFIEQNYSQEPVNPAAGDCHHNLLSLPNISSLGFVQESTQLQNECMVHARSEGHDMADAPFQTSVELAVSTSIRPTAMDSLREHMLISDDECCRVLFSEAISDDGPSSVDYNKGVHMVDLSGCTSILHESSLPSASVPTANDGRLQCTSETKHLLQPEDQQFVSRAHDVYANDLASAPSIYGICSAEMQEESDIVNDTSKLIPVNSFGCGPDTKKTDHSIMEKPNGHAEQEDTGALCYEPPRFPSSDIPFFSCDLVQSGSDMQQEFSPLGIRQFMMSSMNCLTPFRLWDSPCHDKSPDALLKSAAKTFTGTPSILKKRHRDFLSPLSDKRLDKKLETSNLIKNFSRLDVMFDDSETQKADPLSPSTLKENLGPSSEMEQVDKKNEPPMLDDNKSVNDKDASDFLDKTEQRALDVDSKRNDDVNTTVEIVQQHSGVLVDRDPNNLLLNSPKQVGVKSDIVLSARTNKHACSSVKSPCIRVKENERVSIALTCVQSVCSTAAVENLGDQTGKDGGFETSSIFNETPFRRSLESPSPWKSPWFINTFLSSPRIDTEITIEDFGIFMSPCDRSYDAIGLMKQVSEQTAAQYANAHEILENETPKALPKDASRNNRDENKENNDPQKQHVNHSQLTSKALVERRILDFSECGSPGKGDSSKSSSMILESPSSYLKDCR* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1810 986 MobiDBLite consensus disorder prediction 963 978 - -
Ahy10g1810 986 MobiDBLite consensus disorder prediction 910 935 - -
Ahy10g1810 986 Gene3D - 36 88 - -
Ahy10g1810 986 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Ahy10g1810 986 SMART sant 36 85 IPR001005 -
Ahy10g1810 986 SMART sant 88 137 IPR001005 -
Ahy10g1810 986 SMART sant 140 188 IPR001005 -
Ahy10g1810 986 MobiDBLite consensus disorder prediction 667 717 - -
Ahy10g1810 986 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Ahy10g1810 986 MobiDBLite consensus disorder prediction 204 263 - -
Ahy10g1810 986 CDD SANT 143 183 IPR001005 -
Ahy10g1810 986 MobiDBLite consensus disorder prediction 237 261 - -
Ahy10g1810 986 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Ahy10g1810 986 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Ahy10g1810 986 MobiDBLite consensus disorder prediction 204 227 - -
Ahy10g1810 986 PANTHER TRANSCRIPTION REPRESSOR MYB5 7 985 - -
Ahy10g1810 986 PANTHER MYB PROTEIN-RELATED 7 985 - -
Ahy10g1810 986 Coils Coil 890 910 - -
Ahy10g1810 986 MobiDBLite consensus disorder prediction 688 717 - -
Ahy10g1810 986 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Ahy10g1810 986 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Ahy10g1810 986 CDD SANT 40 83 IPR001005 -
Ahy10g1810 986 Gene3D - 142 199 - -
Ahy10g1810 986 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Ahy10g1810 986 SUPERFAMILY Homeodomain-like 38 93 IPR009057 -
Ahy10g1810 986 MobiDBLite consensus disorder prediction 906 944 - -
Ahy10g1810 986 Pfam Myb-like DNA-binding domain 92 150 - -
Ahy10g1810 986 MobiDBLite consensus disorder prediction 671 686 - -
Ahy10g1810 986 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Ahy10g1810 986 MobiDBLite consensus disorder prediction 957 986 - -
Ahy10g1810 986 CDD SANT 91 135 IPR001005 -
Ahy10g1810 986 Gene3D - 89 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1810 Ahy-Chr10 101520098 101526089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1810 8 986 MYB Transcription Factor Family AT4G32730 44.272 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy10g1810 Myb_DNA-bind_6 5.00E-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1810 - K09420 gmx:100811335 1337.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2274 20 124975595 124981627 Ahy10g1810 10 101520098 101526089 hybridization
Ahy16g2848 16 142319519 142325167 Ahy10g1810 10 101520098 101526089 PCT
Ahy10g1810 10 101520098 101526089 Ahy16g2848 16 142319519 142325167 PCT