Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1805 ATGGTGAACTCGTTAGTTGAACGTGCCACGAGCGACATGCTGATTGGTCCTGATTGGGCTTTGAACCTTGAAATCTGTGACATACTCAACCATGATCCTGGGCAAGCAAAGGATGTCGTTAAAGGCATAAAGAGGCGGATTCGAAGTAAAAATCCTAAAGCTCAACTCCTTGCATTAACTTTGCTGGAAACAATTGTAAAGAACTGTGGAGATACTGTTCACATGCATGTTGCAGAGAAAGAGGTTCTTCATGAGATGGTGAAAGTAGCAAGGAAAAAGCCTGATTCTAATGTCAGAGAGAAGATACTGAATCTTATTGATACTTGGCAAGAAGCCTTTGGAGGCCAAAGAGCAAGATATCCTCAATATTATGCTGCATACCAAGAACTGTTGCATGCAGGAGCAGTATTCCCTCCAAGATCTGAAAGTTCTCCACCTGTATTCACACCTCTACAAACACGTCCATTGACATCACATCCACAAAATATCCGCAACTTTGATGTGCAGGGGGACACAGCTGGGTCATCATCAACCGGGTCATCAACCGAGGCTGAGTTTCCAACCCTAAGTTTGTCTGAGATTCAAAACGCACGTGGTATCTTGGATGTTCTTGCAGAGATGCTGAATGCAATAGACCCTGGAAATAAAGAAGGGCTTAGACAGGAGGTTATAATTGAATTGGTGGGCCAGTGCAGAACTTACAAACAGAGAGTGGTACATCTTGTTAACTCAACTTCTGATGAGTCACTCCTATGCCAAGGTCTAGCTCTTAATGATGATCTACAACGTGTACTGGCCAAGCATGAATCCATTGCTTCAGGAACTTCTAATCAAAAGGACAACGAGAAACCAAAGCCTTCAACTCCTGGAGCACTTGTTGATCATCCTCTGGTTGATACTGAAGATGGTGGTAAACAAAGCGATGAGAGATTACCATCTAATGCTGAAGCTGAGTCCCAGCCATTCAACCAATTACTACTTACTGCACCCCCAACAGCAAATGGTTCTGCTGCCCCTTTGAATGTTAATGCCAAATGGGACCTACTCAGTGGTGATGACTATAACTCATCACCTAAAGCTGATAACTCACTTGCTCTTGTTCCTCTAGGAGAACAGCAGCCAGCCAGTCCAACGCCTCATCAGAATAATGCACTTGTTCTTTTTGATATGTTCTCTAATGGTAACAATGGACCTGCTCCAATTCTTGGCCAACCAAATTCATTATCCCCCCAATTTCATCACCAGACATTCATATCTCAAGGCATATTTTATCCCAATGTAAATATGCCAAATGTGGGATCACCTCGTTATGAGCAACAATCATCACCATTTGCACAAACCACAGCTCCTATTTGGAATAATTCTCAGGCCCAACAACAACATCAACAACAACCACCACCACCAAATTCACCAGCTTATGGCACACAAAGTGGTGGATCATTTCCGCCGCCACCTTGGGAAACAACCGAAAATGGTAGTCCTACAGCAGCAGGCAACCAATATCCACAACCGTTACAGGTCACTCAAGTGGTTATGACACATGTACAGAATGCTGGTACGCATGGTCAAGGACTACCTCAGCCAATGGGGAATGATCAAGCTATCAGTATGTATATGCAGCAGCCAAATGCAAATACCTATATGTCAACAATCAATAACAATAATGTTGGTCAAAGCAATCAGCAATTCCCTCAGCAGATTCAAGGTGTTCCTAGTGGTGCTTACATGTCTATGGTTCCACATCAAATGCAAAATGGCAACATGGCTTACATGTATCCACAACAAATGTACGGCAACCAATTCGTCGGATATGGTTACGGTCAGCAGCAACAAGGGGTTCAATATGTTGAGCAACAGATGTATGGTTTATCTGTGAGTGATGACAATGGTATGAGAAACTCTTACCAAGTTTCTGCTACTTCTTATGTGCCATCTGGAAAACCTTCAAAGCCAGAGGATAAGTTGTTTGGGGACCTTGTTGATATGGCTAAAGTGAAATCCCCTAAAACAACTGCTCCTGATCGAGCTAGTAACACCTAG 2040 0.4324 MVNSLVERATSDMLIGPDWALNLEICDILNHDPGQAKDVVKGIKRRIRSKNPKAQLLALTLLETIVKNCGDTVHMHVAEKEVLHEMVKVARKKPDSNVREKILNLIDTWQEAFGGQRARYPQYYAAYQELLHAGAVFPPRSESSPPVFTPLQTRPLTSHPQNIRNFDVQGDTAGSSSTGSSTEAEFPTLSLSEIQNARGILDVLAEMLNAIDPGNKEGLRQEVIIELVGQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLAKHESIASGTSNQKDNEKPKPSTPGALVDHPLVDTEDGGKQSDERLPSNAEAESQPFNQLLLTAPPTANGSAAPLNVNAKWDLLSGDDYNSSPKADNSLALVPLGEQQPASPTPHQNNALVLFDMFSNGNNGPAPILGQPNSLSPQFHHQTFISQGIFYPNVNMPNVGSPRYEQQSSPFAQTTAPIWNNSQAQQQHQQQPPPPNSPAYGTQSGGSFPPPPWETTENGSPTAAGNQYPQPLQVTQVVMTHVQNAGTHGQGLPQPMGNDQAISMYMQQPNANTYMSTINNNNVGQSNQQFPQQIQGVPSGAYMSMVPHQMQNGNMAYMYPQQMYGNQFVGYGYGQQQQGVQYVEQQMYGLSVSDDNGMRNSYQVSATSYVPSGKPSKPEDKLFGDLVDMAKVKSPKTTAPDRASNT* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1805 679 MobiDBLite consensus disorder prediction 298 312 - -
Ahy10g1805 679 Gene3D - 1 147 IPR008942 -
Ahy10g1805 679 CDD GAT_GGA_like_plant 193 271 - -
Ahy10g1805 679 MobiDBLite consensus disorder prediction 270 284 - -
Ahy10g1805 679 MobiDBLite consensus disorder prediction 270 318 - -
Ahy10g1805 679 Pfam GAT domain 201 273 IPR004152 GO:0035091|GO:0043130
Ahy10g1805 679 MobiDBLite consensus disorder prediction 473 501 - -
Ahy10g1805 679 MobiDBLite consensus disorder prediction 659 679 - -
Ahy10g1805 679 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Ahy10g1805 679 ProSiteProfiles GAT domain profile. 185 273 IPR004152 GO:0035091|GO:0043130
Ahy10g1805 679 CDD VHS 2 130 - -
Ahy10g1805 679 Pfam VHS domain 3 130 IPR002014 GO:0035091|GO:0043130
Ahy10g1805 679 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Ahy10g1805 679 MobiDBLite consensus disorder prediction 454 501 - -
Ahy10g1805 679 MobiDBLite consensus disorder prediction 153 186 - -
Ahy10g1805 679 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Ahy10g1805 679 PANTHER TARGET OF MYB PROTEIN 1 1 668 - -
Ahy10g1805 679 PANTHER TOM1-LIKE PROTEIN 1 668 IPR044836 GO:0035091|GO:0043130|GO:0043328
Ahy10g1805 679 Pfam CID domain 28 111 IPR006569 -
Ahy10g1805 679 SUPERFAMILY GAT-like domain 145 274 - -
Ahy10g1805 679 Gene3D - 188 280 IPR038425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1805 Ahy-Chr10 101182759 101191939 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1805 - - gmx:100805762 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3132 17 133048418 133050255 Ahy10g1805 10 101182759 101191939 hybridization