Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1802 ATGGAGCAGAGCGAAACGGCTTTGGATCTAGCTCCGAGGAAATTGGTGAGGCAGTTGGATTTCACAGCACACCTGAAACTGCCGCCGACTCCGCCGCCGCAGTCGCTGGCACAGGCGATTCCGCGAACGCCATCACGATCACCGTTGCAATTGCAATTGACTCTGCATCCGCTAGGGCAACAGCAACAACAGCAGCAACAACCGCAGCCGTGGTTGTTTTCGCAGGGACAGCAGCTGAGAGCGCCGCCGCAGTCGCCAGCAGTGCGGCAGCAAAAGCTTTCGCCGGTTCCTCGAATTCCGTACACTGTGCAGAAGCTTCCGGTAAAGGCGTTCAAAGTGTCGAAGCAGGAGTCTCCCAGTCCCAGGTCACAACCTTGGCATAATGTTGAATTGAAAGACAGCACTCCAAAGAAATCAAAACAATGTAACTGCAAAAATTCTCGATGCCTCAAATTGTACTGTGAATGCTTTGCGTCTGGGATGTATTGTGATGGTTGCAATTGTACAAATTGTCAAAACAATGTGGATAATGAGGCAGCCAGACAGGAGGCTGTTGGACTAACATTAGAGCGCAATCCAAATGCTTTCAGACCAAAAATTGCTAGCAGTCCACAAGAAACTCGAGATTCCAAGGAAGATGTATCTGAAATTCAATTAGTTGGAAAGCACAATAAAGGATGTCACTGTAAAAAATCAGGTTGCCTTAAGAAGTATTGTGAGTGCTTCCAAGCCAATATCCTCTGCTCTGAAAATTGCAAATGCATGGACTGCAAGAATTTTGAAGGAAGTAATGAAAGAAGAGCAAGTTTTCATGAAGAGTGTAATATGTTTCACATCAAACAGGAAGCAAATGCTGCCATCAGTGGAGCAGTTGGTTCCTCTGGCTACGGGACTGGAATTGCCATAACACCCAAGAAAAGAAAAATTCAGGAAATATTTTCTAGCAAATCGTCGATAGATAAAACTGTTTGCCAAACATCTCAATATCAACAGGAAACTGATCCTATAGTTACACCATCGACATCTCAGTCAACTGCCTTTTATGTTGACACTGCCAACACTAGAAATTCAGGTTATTCAAGATCTACATACAGGTCACCATTGGCGGATGTCCTCCAGCCACAAAATGTGAAGAATCTCTGTTCACTTTTTGTTGTTCTCTCAGGAGTAGCTGCCAAAACGAATGCAGAAATGAGAGCCAAAGTAGGCCTGAACGTTGATGCTGGGAAATTTAAATCTTCTATTCCTTCATCAACTCAGTTGCTGCAAGACAGGGAAGATGTCCGCAAGTTTGTATGTGATGATCATAAAGATGAAGTAGATAGAGTTGATATTGACTGTTATAATAGGCCACTTTCACCAGAAACCCTATCACTGATGTGTGATGAACAAGATGAGGTGTTTTTCAATAATGGTTCTGCAAATAGAGTGGCATGCAACAATTTTCAAAGTATTGTTCAAAAGTCATCTACTTCTGATCGATGCCCTGATGTGTATGAGGAGCAAGAAAGGGTTGTACTCACAAAGTTCTGGGATGTTCTACGTGGACTCATTACTGTTGGAAGCATAAAAGAAACAATGTGCTCTTCATTAGCCAAGAAAGATGGGGGAAGCGAGGAAGAACCTGCAGCCAACAGTAATGGTGCTGAAGTTGATATAGGGAGTGAAAAGAAGGAAACTCCCAGCAACTGTGTTGCAAGGTGCCCCATCTCATCATCGGCCATTGAAATATCTCAGAAAAAGCATGCAATGATCAATGGCAATGATGATCTTGATCTCTCCTTAAGGTTTGCTTGCCAATTTTATGGAAGGGAATGA 1818 0.4367 MEQSETALDLAPRKLVRQLDFTAHLKLPPTPPPQSLAQAIPRTPSRSPLQLQLTLHPLGQQQQQQQQPQPWLFSQGQQLRAPPQSPAVRQQKLSPVPRIPYTVQKLPVKAFKVSKQESPSPRSQPWHNVELKDSTPKKSKQCNCKNSRCLKLYCECFASGMYCDGCNCTNCQNNVDNEAARQEAVGLTLERNPNAFRPKIASSPQETRDSKEDVSEIQLVGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSNERRASFHEECNMFHIKQEANAAISGAVGSSGYGTGIAITPKKRKIQEIFSSKSSIDKTVCQTSQYQQETDPIVTPSTSQSTAFYVDTANTRNSGYSRSTYRSPLADVLQPQNVKNLCSLFVVLSGVAAKTNAEMRAKVGLNVDAGKFKSSIPSSTQLLQDREDVRKFVCDDHKDEVDRVDIDCYNRPLSPETLSLMCDEQDEVFFNNGSANRVACNNFQSIVQKSSTSDRCPDVYEEQERVVLTKFWDVLRGLITVGSIKETMCSSLAKKDGGSEEEPAANSNGAEVDIGSEKKETPSNCVARCPISSSAIEISQKKHAMINGNDDLDLSLRFACQFYGRE* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1802 605 PANTHER TESMIN/TSO1-RELATED 1 574 IPR028307 -
Ahy10g1802 605 MobiDBLite consensus disorder prediction 533 562 - -
Ahy10g1802 605 MobiDBLite consensus disorder prediction 113 137 - -
Ahy10g1802 605 ProSiteProfiles CRC domain profile. 138 262 IPR005172 -
Ahy10g1802 605 MobiDBLite consensus disorder prediction 116 130 - -
Ahy10g1802 605 SMART CXC_2 222 263 IPR033467 -
Ahy10g1802 605 SMART CXC_2 137 177 IPR033467 -
Ahy10g1802 605 MobiDBLite consensus disorder prediction 24 48 - -
Ahy10g1802 605 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 225 259 IPR005172 -
Ahy10g1802 605 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 140 174 IPR005172 -
Ahy10g1802 605 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 1 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1802 Ahy-Chr10 101127025 101132599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1802 13 533 CPP Transcription Factor Family AT4G29000 45.704 1.68e-129 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Ahy10g1802 TCR 3.20E-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1802 - K21776 gmx:100811459 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2266 20 124722738 124727967 Ahy10g1802 10 101127025 101132599 hybridization