Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1782 ATGGCCAACAAGATCGCTCTTGGAACCACCAGAGAGGCCACCCAGCCAGATTGCATTCAGGCCCTCGTGGTTGAGTTCATAACCACCTTCCTCTTTGTCTTCGTCGGCGTTGGTTCCGCCATGGCCGCTGACAAGCTGAGTGGAGATGCGCTGGTGGGCTTGTTTGCCGTGGCCGTGGCACATGCACTTGTGGTGGCTGTCATGATTTCAGCCGGTCATATCTCCGGCGGGCACCTCAACCCTGCCGTGACCCTTGGGCTGCTGGTCGGCGGGCACATCACGGTGGTCCGATCGGTCCTTTATTGGATAGATCAGTTGGTGGCATCTGCAGCAGCTTCTTACCTTCTTTACTACCTTTCCGGAGGACTGGCAACTCCGGTTCACACTCTAGCAAGTGGAGTTGGGTACACTCAAGGGGTGATTTGGGAAATAGTGTTGACTTTCTCGTTGTTGTTTGCTGTCTATGCAACTATGGTGGATCCAAAGAAAGGAGCTCTCGCTGGACATGGGCCCACACTTGTTGGGTTCGTTGTTGGGGCCAACATTCTCGCTGGTGGGGCCTTCTCTGCGGCCTCAATGAACCCAGCAAGATCTTTTGGGCCTGCATTGGTCGCTGGTAACTGGACTGATCACTGGGTTTATTGGGTTGGGCCTCTCATTGGTGGAGGCCTTGCAGGTTTCATGTATGAGCATTTCTTCATTGACCGTACCCATGTTCTGATCCCTCGTGATGAAGAAAACTAA 744 0.5376 MANKIALGTTREATQPDCIQALVVEFITTFLFVFVGVGSAMAADKLSGDALVGLFAVAVAHALVVAVMISAGHISGGHLNPAVTLGLLVGGHITVVRSVLYWIDQLVASAAASYLLYYLSGGLATPVHTLASGVGYTQGVIWEIVLTFSLLFAVYATMVDPKKGALAGHGPTLVGFVVGANILAGGAFSAASMNPARSFGPALVAGNWTDHWVYWVGPLIGGGLAGFMYEHFFIDRTHVLIPRDEEN* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1782 247 PANTHER AQUAPORIN TIP4-1 3 246 - -
Ahy10g1782 247 PRINTS Major intrinsic protein family signature 60 84 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g1782 247 PRINTS Major intrinsic protein family signature 20 39 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g1782 247 PRINTS Major intrinsic protein family signature 175 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g1782 247 PRINTS Major intrinsic protein family signature 212 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g1782 247 PRINTS Major intrinsic protein family signature 142 160 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g1782 247 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g1782 247 ProSitePatterns MIP family signature. 78 86 IPR022357 -
Ahy10g1782 247 SUPERFAMILY Aquaporin-like 12 240 IPR023271 -
Ahy10g1782 247 Gene3D Glycerol uptake facilitator protein. 3 242 IPR023271 -
Ahy10g1782 247 Pfam Major intrinsic protein 14 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g1782 247 PANTHER AQUAPORIN-8 3 246 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1782 Ahy-Chr10 100482239 100484324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1782 3 246 Major Intrinsic Protein MIP AT2G25810 79.098 1.10e-130 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1782 K09873 - gmx:100811447 414.461