Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1738 ATGGTGGTAGAGGATGCTATGGTGGTGGTCGTCACGGTTGTTGTGCGTGGTGGTGGATACAAAGGAGGAGGCGATAGCTGTGGCGATAATGATTGCTATTACTATGGTGTACCTATGACAGAAGGTGCTGAAGAATTTGAACAACAGACAGACTCACCAAATAAAATTGTTGCCAGTCAATCAAGTTCTGAAAATATGAAAAACTACACTAACTCTAATGAGGTCATAAACCAAGCCATTGGTGAAGAGGAGCTAGATCCCAAGGAGGGAATGTGCTTCGGCACATTAGAAGATGCGCGTACATATTATTACCGATATGCGGCTAGGACTGGATTTGTCGTCAAAATAAGAACCACTAGCTGGGAGACTAGAAGCGATCAGAGGATGGTTGTTAATCAGACTTTGCATTGTAACAGAGATGGATACCGCACATCCCGTGTAAAGGCACGCAAGAGAAGGAAAACGGTGGCCTCAACAAACTGCAAAGCCCGTTGCTATTTGGCATTAGATAAAATGACAGGACAGTGGAGGATTTCTCGAGTAGAGTTATCCCACTCTCACCCGCTTAATCCGAAGCTATCTGGAATGTTCTCAGCAAATCGTCAGCTAAGTATGCATGTGAAGGACCTGATACAGCAAAATAACCAAGCTGGCATTAGACCGAGTAAGACGTACCAGGCACTAGCCAATGCCGTCGGTGGCCCTGCCAACCTCACCTTTACAGAGAAGAATGTTACAAATTACATCAGTCGTCACTTACGCATTTTCGGGGATGAGACAGATCCAAAAGAAGCTGCATGGGAATATTTTGGTGATGTTGTGATGTTTGACACTACTTACAAAACTAATAGGTACGACATGCCATTTGGGTCTTTCGTAGGTGTCAACCACCATGGGATGTCTACGCTTTTTGGGTGCGCATTATTGCGGAATGAGGACACTCATATATTTGCTAACCGACACATGTGGGTGCCAGTATTTTTCAAGGATGAATTCTGGGCTGACATGAGGAGCACACAACGTAGTGAGATCATGCATTCAGTTTTTGATAAGTACTTAAACAGTAAGAGCTCTTTGTTGCTATTTGTTCACCAATACCAAAACTGTTTTATAGACAAGGAGCAAAAGGAGCTTGAGTGTGATGCTGCTGATTTAAGGAGTATTATCCCTTGTATTTCTAACTCACCAATAGAAAAGCAGTTCTAG 1206 0.4345 MVVEDAMVVVVTVVVRGGGYKGGGDSCGDNDCYYYGVPMTEGAEEFEQQTDSPNKIVASQSSSENMKNYTNSNEVINQAIGEEELDPKEGMCFGTLEDARTYYYRYAARTGFVVKIRTTSWETRSDQRMVVNQTLHCNRDGYRTSRVKARKRRKTVASTNCKARCYLALDKMTGQWRISRVELSHSHPLNPKLSGMFSANRQLSMHVKDLIQQNNQAGIRPSKTYQALANAVGGPANLTFTEKNVTNYISRHLRIFGDETDPKEAAWEYFGDVVMFDTTYKTNRYDMPFGSFVGVNHHGMSTLFGCALLRNEDTHIFANRHMWVPVFFKDEFWADMRSTQRSEIMHSVFDKYLNSKSSLLLFVHQYQNCFIDKEQKELECDAADLRSIIPCISNSPIEKQF* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1738 401 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 315 401 IPR031052 GO:0006355
Ahy10g1738 401 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 58 217 IPR031052 GO:0006355
Ahy10g1738 401 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 265 317 IPR031052 GO:0006355
Ahy10g1738 401 PANTHER OS03G0843700 PROTEIN 58 217 - -
Ahy10g1738 401 PANTHER OS03G0843700 PROTEIN 265 317 - -
Ahy10g1738 401 PANTHER OS03G0843700 PROTEIN 315 401 - -
Ahy10g1738 401 Pfam MULE transposase domain 273 318 IPR018289 -
Ahy10g1738 401 Pfam FAR1 DNA-binding domain 101 191 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1738 Ahy-Chr10 98657552 98666143 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy10g1738 FAR1 9.10E-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1738 - - adu:110276948 771.155