Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1730 ATGAGAATAGGGTCCATGGATGCTAATAATAACAACAGCAGTAAGCAACAAGGTCCTCCAAAAGGCGGTGAAATAAGCATGTGGGAGAAGCAAACAACAGCAGTGGTGGTTGCGATTCCAAGCGAGAGCCAAGATTCCAAAGGGGTTACTGAATCTTTGACACCAAAGCATAGCAGTAGAGTTGACTCCCCTCTCACAATGCACAACAACGACAACAATGATGCTGCTTCAGTCTATGGAACCACAAAGTCACCACCTTTGAACTGTGCTTCCCCTGAAATAAGGTTCATGCCAAGCCCTAACAAGCCCCCAAGAATTCCCAATTCAAATGCAAACCTTGTCAGAAGGAAATCACTTTCAAGGTCAGTGTATTCCAAACCCAAATCAAGGTTTGGTGAACAGCCTTATCCCATTGATGGTTCTGTTTTAGATGACAGTAATGTTAGTGGCATTTCAACTTTGCAAGAACAGTTAGCTGGTAACTCACCGTATAGGACCTCATTCAAAGCATCATCGCCTAATAACAAACCTGGGACTGTTAATAGAACAGTTTCCATCACTTCCGTGACTCCCAAGACGCCTTTGATGGCGTCTCCCGGTCCTGCCGGGGAGGATGAGGACGAAATCATTTACAAGAAAGTTGAATTGAGTAAAGAGAAGCGTAAGAGAGTGACCACTATGGTTTTGATTGAATGCTTTGTGTTTGTGTGCCTTGCTGGTACCTTGATAGCTAGCTTGACAGTTGAAAAGCTCAGGGCGACGATGATTTGGGGGTTGGGGATTTGGAGATGGTGCGTTCTTGTGTTGGTGACATTTTGTGGCATGTTAGTTACAAGATGGTTTATGCACCTTGTTGTTTTCTTGATTGAGATGAACTTTCTGTTGAGGAAAAAGGTGCTCTATTTTGTCCATGGACTTAAGAAATCTGTTCAGGTCTTCATTTGGCTCGGTTTAGTTCTTCTCACATGGGTGCTACTAATCAATCGTGGCGTGACACGATCTAAATTAGCCTCGAAAATCTTGGATGGTGTGACATGGACTCTTCTTTCCCTTCTACTTGGAGCATTCTTGTGGTTGATAAAGACATTGCTGCTGAAGATTTTGGCATCGAATTTCCATGTCAAGTCTTTCTTTGATCGGATTCAAGAATCGATATTCCATCAGTACATTTTGCAGACTCTGTCTGGGCCTCCGCTTATAGAAGAAGCTGAGAAGGTTGGGGGATCATTAAGTATTGGTCAATTTAGTTTCAAGAGTACAACAGGTAAAGGTGGCACAAAGAAAGAGGTTATTGATATGGCAAAGCTTCATAAGATGAAACAAGAGAAAGTTTCAGCCTGGACTATGAAGAATTTGATAGATGCTGTGACAAATTCAGGTCTGTCCACGATCTCTAATTCACTAGACGAAAGTTTCGACGATGGAGTGACTGAGCAAACTGATAAAGAGATTACAAATGAGATGGAAGCCACTGCTGCCGCCTATCTCATCTTCAGGAATGTTGCTGCCCCTGGTTGCACGTATATTGATGAGTATGAACTGAGGAGGTTTATGATCAAGGAAGAAGTTGATTTAGTATATCCTCAATTGGCACAAGCAGAGACAGGGCAAATTACCAGAAAGTCATTAGCAGATTGGGTGTTGAAGGTATATCAAGAACGAAAAGCATTGGCACATGCCTTAAGCGATACCAAAACAGCCGTAAGACAATTGAACAAACTTGTGACAGGGATCCTAGTGATTGTGACTATAGTAATTTGGCTTCTACTGATGGAGATTGCAACGACAAAAGTACTTGTTTTCCTCTCTTCGCAGCTAGTACTTGCCGCTTTCATGTTTGGAAATACATGCAAGAACATTTTTGAAGCTATCATCTTCGTGTTTGTGATGCATCCATTTGATGTTGGTGACCGATGCGTTGTAGATGGCGTGGAGTTATTGGTTGAAGAAATGAACATACTGACAACAGTGTTCTTGAAGCTGAATAATGAAAAGGTGTACTATCCAAACTCAGTCCTTGCCATGAAACCAATTAGCAATTATTATAGAAGCCCGGATATGGGTGATGGGGTAGAATTTGCCATCGATTTTTCGACGCCAGCAGAGAAGATCGGTGCACTGAAAGAAAAGATAAAGAGGTACTTGGAGAGGAATCCACAATACTGGCATCCTAATCACGGGTTAGTAGTGAAGGAGATTGAGAATGTGAACAAGATTAAGATGGGTGTGTATGTGGTGCACACAATGAACTTTCAAGAGTTTGGGGAGAAGAACAAGCGAAGAACTGAACTGGTGATTGAATTGAAGAAGATATTAGAAGAGCTAGATATCAGATACAACCTTCTTCCACAAGCTGTTCATGTTAGCCATGTTGAATCAAATACAAGTCCACTCGAGATAATGAGGATGATGTTGGTGTTTGTGTGTGTTTCTAATTAG 2439 0.419 MRIGSMDANNNNSSKQQGPPKGGEISMWEKQTTAVVVAIPSESQDSKGVTESLTPKHSSRVDSPLTMHNNDNNDAASVYGTTKSPPLNCASPEIRFMPSPNKPPRIPNSNANLVRRKSLSRSVYSKPKSRFGEQPYPIDGSVLDDSNVSGISTLQEQLAGNSPYRTSFKASSPNNKPGTVNRTVSITSVTPKTPLMASPGPAGEDEDEIIYKKVELSKEKRKRVTTMVLIECFVFVCLAGTLIASLTVEKLRATMIWGLGIWRWCVLVLVTFCGMLVTRWFMHLVVFLIEMNFLLRKKVLYFVHGLKKSVQVFIWLGLVLLTWVLLINRGVTRSKLASKILDGVTWTLLSLLLGAFLWLIKTLLLKILASNFHVKSFFDRIQESIFHQYILQTLSGPPLIEEAEKVGGSLSIGQFSFKSTTGKGGTKKEVIDMAKLHKMKQEKVSAWTMKNLIDAVTNSGLSTISNSLDESFDDGVTEQTDKEITNEMEATAAAYLIFRNVAAPGCTYIDEYELRRFMIKEEVDLVYPQLAQAETGQITRKSLADWVLKVYQERKALAHALSDTKTAVRQLNKLVTGILVIVTIVIWLLLMEIATTKVLVFLSSQLVLAAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVVDGVELLVEEMNILTTVFLKLNNEKVYYPNSVLAMKPISNYYRSPDMGDGVEFAIDFSTPAEKIGALKEKIKRYLERNPQYWHPNHGLVVKEIENVNKIKMGVYVVHTMNFQEFGEKNKRRTELVIELKKILEELDIRYNLLPQAVHVSHVESNTSPLEIMRMMLVFVCVSN* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1730 812 MobiDBLite consensus disorder prediction 119 138 - -
Ahy10g1730 812 MobiDBLite consensus disorder prediction 1 20 - -
Ahy10g1730 812 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 59 789 - -
Ahy10g1730 812 Pfam Mechanosensitive ion channel 573 778 IPR006685 GO:0016020|GO:0055085
Ahy10g1730 812 SUPERFAMILY Sm-like ribonucleoproteins 622 681 IPR010920 -
Ahy10g1730 812 MobiDBLite consensus disorder prediction 36 86 - -
Ahy10g1730 812 Gene3D - 632 681 IPR023408 -
Ahy10g1730 812 MobiDBLite consensus disorder prediction 1 86 - -
Ahy10g1730 812 PIRSF Memb_At2g17000 9 803 IPR016688 -
Ahy10g1730 812 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 59 789 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1730 Ahy-Chr10 98253075 98256225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1730 61 789 Mechanosensitive Ion Channel Family AT5G12080 59.618 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1730 K22048 - gmx:100803107 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2178 20 120653710 120657540 Ahy10g1730 10 98253075 98256225 hybridization