Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1709 ATGACTAAGATTACATGGAAATCAATCATCCCAAGTTGTTACAAGACCAAAAGCAAAGTAGAAGAAGAAGAGGTTTCAAAACATTGTTCTTTCCAAAGGCTATGCCTCTCTGATGTAAGCATTACAAGCTCTCCTAAGGACATTGAAGATCTTTCAACTTCTTTTGTTGGATCAAAGCTTTACACATTCACCTTAGACGAGCTAAAAGAAGCAACGCATAATTTCTCATGGAGTAACATGCTTGGTGAAGGTGGGTTTGGACCTGTTTACAAAGGTTTTGTTGATGACAACCTTAAACGTGGTCTGAAGGCTCAATCCGTGGCAGTTAAACGGTTAGACTTGGAAGGCTTGCAAGGTCACAGAGAGTGGCTGGCAGAGATTATATTTCTTGGGCAGCTAAGGCATTCACATCTTGTTAAGTTAATTGGATACTGTTGTGAAGAAAAGAACAGGCTTTTGGTGTATGAATACATGCCAAGAGGTAGCTTAGAGAACCAATTATTCAGAAGGTATTCTTCTAGCATGCCATGGTCAACAAGGATGAAAATTGCATTAGGTGCTGCTAAGGGCCTTGCATTCCTTCATGAAGCAGATAAACCTGTCATATACAGAGATTTCAAAACTTCAAATATCTTACTTGACTCAGACTACACAGCTAAATTATCGGACTTTGGGTTAGCTAAGGATGGTCCTGAAGGAGAAGAAACACATGTAACAACAACACGCATAATGGGGACAAAGGGCTATGCTGCCCCTGAATATGTCATGGCAGGTCACCTTTCTACCAAGAGCGATGTGTATAGCTATGGAGTGGTTCTGTTGGAGCTTCTTACAGGGAAGCGAGTGGTGGATAGGAGCCGTCCGAGTCGAGAGCGGAGCCTGGTGGAATGGGCAAGGCCTATGTTGAGGGATCAAAGGAAGCTGCATCATGTGATGGACCCAAGGTTGGAAGGGCAGTTTCCTATGAAAGGAGCAGTTAAGGTTGCTGCATTGACACATAAATGCTTGAGTCACAACCCCAATCCAAGACCCTCAATGAGGGATGTTGTCAAGACATTGGAGTCACTTCAAGACTTTGATGATGTCTTCATAGCACCATTTGTTTATGTTGCAGTTAGTGAAAAGAAATAG 1131 0.4253 MTKITWKSIIPSCYKTKSKVEEEEVSKHCSFQRLCLSDVSITSSPKDIEDLSTSFVGSKLYTFTLDELKEATHNFSWSNMLGEGGFGPVYKGFVDDNLKRGLKAQSVAVKRLDLEGLQGHREWLAEIIFLGQLRHSHLVKLIGYCCEEKNRLLVYEYMPRGSLENQLFRRYSSSMPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGEETHVTTTRIMGTKGYAAPEYVMAGHLSTKSDVYSYGVVLLELLTGKRVVDRSRPSRERSLVEWARPMLRDQRKLHHVMDPRLEGQFPMKGAVKVAALTHKCLSHNPNPRPSMRDVVKTLESLQDFDDVFIAPFVYVAVSEKK* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1709 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Ahy10g1709 376 CDD STKc_IRAK 81 356 - -
Ahy10g1709 376 PANTHER OS01G0588500 PROTEIN-RELATED 17 375 - -
Ahy10g1709 376 Pfam Protein tyrosine and serine/threonine kinase 77 353 IPR001245 GO:0004672|GO:0006468
Ahy10g1709 376 Gene3D Transferase(Phosphotransferase) domain 1 158 364 - -
Ahy10g1709 376 ProSiteProfiles Protein kinase domain profile. 75 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g1709 376 Gene3D Phosphorylase Kinase; domain 1 37 157 - -
Ahy10g1709 376 PANTHER KINASE 1B 17 375 - -
Ahy10g1709 376 SUPERFAMILY Protein kinase-like (PK-like) 51 355 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1709 Ahy-Chr10 97378185 97380527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1709 62 353 Glycoside Hydrolase AT3G07070 52.881 7.37e-102 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Ahy10g1709 PK_Tyr_Ser-Thr 3.40E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1709 - - gmx:100805771 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2147 20 119692828 119695263 Ahy10g1709 10 97378185 97380527 hybridization