Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1692 ATGGCTGGGGATGAAGGTGGTGATGCACCTAATAATAATCATAATCACACTTCATTATCTAATAATTGTGATGATGATAACAACAATAACAAGAAGGTGTACAAAGGGGTGAGGAAGAGAAAGTGGGGGAAATGGGTATCTGAAATTAGGCTTCCAAATAGCCGCGAACGCATTTGGCTTGGCTCTTATGATTCTCCTGAAAAAGCTGCGCGTGCATTCGATGCTGCCCTTTATTGTCTCCGAGGTTGTCGAGCCAATTTCAATTTCCCCGACACTCCTTTCAACTTGAGCACCAGCGCCGTTCATCATCATTCGCTTACTCATCAAGAAATTCAAGAGATTGCTGCTAGCTTTGCCCATTCTCAGGACCCACATCATGATGATCACCAACAAGAACAACCAAATAGCAATGACAATGATTCTTCATCAGTTGGATTGTTAGAATCCAAAGCTGATGCTGCTGTTGTATCTCAAGAGCAAGTGGACAACAACATGATGATGGATTGGACATTTTTGAAGGATTTGGGTGGTTCTTGTTCTGCTGATTGTGGGGGTGCTCTCTATTCTGATGATGAGTTGGACAGAATTGATCATCACTACTCGGGTGATGAATTGTTGTTCTCGGTACCAACTTTTCAGGATAATGTGGCTGATGATGACCCTTTTTTTAACCAATCATTCCTTTGGAATTGGAGCTTCTAA 702 0.4217 MAGDEGGDAPNNNHNHTSLSNNCDDDNNNNKKVYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDSPEKAARAFDAALYCLRGCRANFNFPDTPFNLSTSAVHHHSLTHQEIQEIAASFAHSQDPHHDDHQQEQPNSNDNDSSSVGLLESKADAAVVSQEQVDNNMMMDWTFLKDLGGSCSADCGGALYSDDELDRIDHHYSGDELLFSVPTFQDNVADDDPFFNQSFLWNWSF* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1692 233 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Ahy10g1692 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 18 233 - -
Ahy10g1692 233 MobiDBLite consensus disorder prediction 119 144 - -
Ahy10g1692 233 CDD AP2 34 92 IPR001471 GO:0003700|GO:0006355
Ahy10g1692 233 MobiDBLite consensus disorder prediction 10 27 - -
Ahy10g1692 233 MobiDBLite consensus disorder prediction 120 134 - -
Ahy10g1692 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 18 233 - -
Ahy10g1692 233 Pfam AP2 domain 33 82 IPR001471 GO:0003700|GO:0006355
Ahy10g1692 233 MobiDBLite consensus disorder prediction 1 31 - -
Ahy10g1692 233 Gene3D AP2/ERF domain 33 91 IPR036955 GO:0003700|GO:0006355
Ahy10g1692 233 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Ahy10g1692 233 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Ahy10g1692 233 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Ahy10g1692 233 SUPERFAMILY DNA-binding domain 33 91 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1692 Ahy-Chr10 96889214 96889915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1692 34 231 AP2-EREBP Transcription Factor Family AT1G19210 44.500 2.12e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy10g1692 AP2 2.30E-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1692 - - aip:107622034 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2130 20 119072557 119073443 Ahy10g1692 10 96889214 96889915 hybridization