Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1682 ATGGTGACGAAGAACAACGTTAGAAAATTGTTGGGTTTTGTTTACTCTATGAACTTGGTTGTGTTGTTGGGTGTGGCGGCAGTGGCAGAAAGAGAAGTGAAAGTGGGAGCGGTGCTTGATGTTGGGGTTGGAATGGTTGGGAAAATGGGTTTAAACAGCATCAGAATGTGCATCCATGATTTCTATGTCTCTAATCCTCATTTCAAAACCAGGCTCCAACTTATTCTTAGGGATTCCCAAAGGAACGTTGTTACTGCTGCTGCTCAAGCTTTAGATCTCATAAAGAATGAGCAAGTGGAAGCTGTGATAGGACCAATTACAACAACCGAAGCCATGTTTGTGATCAACCTCGGAGACAAAGCGCACGTGCCCATTGTCACGTTCTCAGCAACGAGCCCTTCTCTCTCATCACTCCACACCCCATATTTCTTTCAAATTGCTCAGAAAGATTCAACTCAGGTGGAAGCCATAACCGCCATTATCCAAGCTTTTCGGTGGAAAGAAGTGGTTCCAATTTATGTAAACAACAGTTATGGCGAAGGACTCATTCCATGGTTAACTAATTCACTTCAAAAAGCATACATCCGTGTTCCTTATCTGTCTGCCATTGATTTCTCAGCCACAGATGATGCCATTGAAAGAGAGCTCTACAAGCTCATGACTATGCAAACTAGAGTCTTTGTCGTTCACATGACACCCCTTCTTGGCTCTCGTCTCTTTGCCATTGCCAAAGCCATTGGCATGATGGATCAAGGTTATGTTTGGATTGTCACTGATGGAATGGCTAATTTCTTCAACTCGTTGGACTCTTCAGTTATGGACTCCATGGAAGGTGTCTTGGGTGTCAGGCCTTATATTCCAAGAACTAAACAGTTTCTTGATTTTAGAGCTCGATGGAAACGACAGTTCCTAAGAGACAATCCAACACTTGTTGATATCAATCTGAATGCTTTTGGAATATGGGCCTATGATGCTACCACCGCATTGGCCATGGCCGTTGAGAAACTTGACAGCACCCTTTCTGGCTTCACTAATGTGAGCAAGAACTCAAGCAATGTGACTGATCTTGAAAACTTTGGCGTTTCGCGAAACGGTGAGAAGCTGAGAGAAGCTTTGTCAAATGTTAGATTCAAAGGTGTTGGTGGTGACTTCAAATTAGTTGGTGGTGGGGAGTTAGAAGCATCAGCATTTGAGATAGTTAATGTGATTGGTAACGGGGAAAAAAACATTGGATTTTGGATGCCAGAAAAGGGACTAATTAGAAGTATGGATAGCAAAACTGCAACAACCGCACATTCAAGTTCTAAAGAGAATCTAGGAAGAATTATATGGCCAGGGGACTCTTACTCTATTCCAAAGGGATGGCAGATTCCCACAAATGGTAAAAAGTTAATGATAGGGGTTCCAGTAAAAGATAGTGGCTACTCTGAATTTGTGAGAATAATCCATGACCCTATTACTAATTCTACAAAGGTCACTGGGTTCTGCATTGATGTCTTCAATGCTGTGGTAGAAGCCTTGCCTTATGCCCTTTCATTTGACTTGATTCCATTTGAAAACTCCAACGGTGAGATGGCAGGAACTTATGATGATTTGGTCAACCAAGTTTATTATGGGAAGTCTGATGGTGTGGTGGGAGATACAACAATTACGGCAAACAGGTCCAATTATGTTGATTTCACATTGCCGTACACAGAATCTGGTGTGACTATGGTTGTTCCAATAAGAGACAGCAGAAAGAAGAATGCATGGGCCTTCTTGAAGCCATTGACATGGGACCTTTGGGTTACAACATTTTGTTCATTTGTATTCATAGGATTCGTTGTTTGGGTTCTTGAACACCGAATTAACAACCATTTCAGAGGGCCTCCTTCTTATCAGATTGGCACTAGCCTGTGGTTTTCCTTCTCAACCATGGTGTTTTCCCATCGGGAGAGGGTAGCAAGCAACTGTGGAAGATTCGTGGTGATAGTATGGGTTTTTGTTGTTCAAATTCTAGTTCAAAGCTACACTGCAAGTCTTACCTCTCTCTTAACAGTTGAACAATTACGCCCAGTTATTACCGATGTGCATCAACTCCTAAAGAATCGGTTGAATGTTGGTTATTTGGATGGTTCTTTTGTTCGTGAAATCTTGAAGGATTTGGGATTCCAAGAAAGCCAGCTCAAGATTTACAGATCTGCAGAAGAATGCAATGATCTCTTCACAAAAGGAACTGCAAATGGTGGCATTGATGCTGCGTTTGATGAAGTTCCATATGTGACACACCTTCTTCAAATTTACTGCTCTAAGTATACCATGATTGAGCCAAGATTTAAAACTGGTGGCTTTGGATTTGTGTTTCCGAAAGGGTCACCTCTTGTAGCAGACATATCAAGGGCAATTTTGAATGTGACTCAAGGAGCCAAAATGAAAACAATTGAGAATGCATGGTTGAATGGAAGCAGTTGTCCAGGATCTAATGCTCAAATTTCTTCTGCGAGTCTAGGACTCGAAAGCTTCTGGGGTCTGTTTCTTGTTATAGGTGTTTCTTGTGCATTAGCACTCATGTTCTTCTTAGCAACATTCCTATATCAGTATAGACATATTCTGTCAAGCCATCAGCCCAGTACTTCAATATGGACAAGAATTGGAACCTTGCTAAGTATCTTCAATGAGAAAGACTTGAGCTCTCACACTTTCAAGAAAAGTGCAAAGCAAGATGCAAGTGTAGCTAGTAGTCCTGCTCATCATCATGGAATAGGTTCAGCTGAGGCATCACCAAGTACACATTGCCCTTCAAGTCCTTATAGCTACACAGAATCAAATTTTTCATTCTATGGAGACCAAGTAATGTTTAGTCCAGATCGACATGGTGATGGAACTCATCAAGGTCATGAGACTCAAGACAGAGAAATGAGGGTGGTGCATGATGATACTCAAGAAGTGGCCACTACAAACAGCAATAATACTAACTCCCAAGCCACATAG 2970 0.4178 MVTKNNVRKLLGFVYSMNLVVLLGVAAVAEREVKVGAVLDVGVGMVGKMGLNSIRMCIHDFYVSNPHFKTRLQLILRDSQRNVVTAAAQALDLIKNEQVEAVIGPITTTEAMFVINLGDKAHVPIVTFSATSPSLSSLHTPYFFQIAQKDSTQVEAITAIIQAFRWKEVVPIYVNNSYGEGLIPWLTNSLQKAYIRVPYLSAIDFSATDDAIERELYKLMTMQTRVFVVHMTPLLGSRLFAIAKAIGMMDQGYVWIVTDGMANFFNSLDSSVMDSMEGVLGVRPYIPRTKQFLDFRARWKRQFLRDNPTLVDINLNAFGIWAYDATTALAMAVEKLDSTLSGFTNVSKNSSNVTDLENFGVSRNGEKLREALSNVRFKGVGGDFKLVGGGELEASAFEIVNVIGNGEKNIGFWMPEKGLIRSMDSKTATTAHSSSKENLGRIIWPGDSYSIPKGWQIPTNGKKLMIGVPVKDSGYSEFVRIIHDPITNSTKVTGFCIDVFNAVVEALPYALSFDLIPFENSNGEMAGTYDDLVNQVYYGKSDGVVGDTTITANRSNYVDFTLPYTESGVTMVVPIRDSRKKNAWAFLKPLTWDLWVTTFCSFVFIGFVVWVLEHRINNHFRGPPSYQIGTSLWFSFSTMVFSHRERVASNCGRFVVIVWVFVVQILVQSYTASLTSLLTVEQLRPVITDVHQLLKNRLNVGYLDGSFVREILKDLGFQESQLKIYRSAEECNDLFTKGTANGGIDAAFDEVPYVTHLLQIYCSKYTMIEPRFKTGGFGFVFPKGSPLVADISRAILNVTQGAKMKTIENAWLNGSSCPGSNAQISSASLGLESFWGLFLVIGVSCALALMFFLATFLYQYRHILSSHQPSTSIWTRIGTLLSIFNEKDLSSHTFKKSAKQDASVASSPAHHHGIGSAEASPSTHCPSSPYSYTESNFSFYGDQVMFSPDRHGDGTHQGHETQDREMRVVHDDTQEVATTNSNNTNSQAT* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1682 989 PIRSF IGluLR_plant 4 938 IPR017103 -
Ahy10g1682 989 Gene3D - 726 819 - -
Ahy10g1682 989 Gene3D - 463 583 - -
Ahy10g1682 989 MobiDBLite consensus disorder prediction 973 989 - -
Ahy10g1682 989 CDD PBP1_GABAb_receptor_plant 34 423 IPR044440 -
Ahy10g1682 989 MobiDBLite consensus disorder prediction 952 972 - -
Ahy10g1682 989 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 909 - -
Ahy10g1682 989 PANTHER GLUTAMATE RECEPTOR 2.9 33 909 - -
Ahy10g1682 989 SUPERFAMILY Periplasmic binding protein-like II 442 814 - -
Ahy10g1682 989 Gene3D - 584 715 - -
Ahy10g1682 989 SUPERFAMILY Periplasmic binding protein-like I 26 446 IPR028082 -
Ahy10g1682 989 Pfam Ligand-gated ion channel 814 844 IPR001320 GO:0015276|GO:0016020
Ahy10g1682 989 SMART GluR_14 465 814 IPR001320 GO:0015276|GO:0016020
Ahy10g1682 989 MobiDBLite consensus disorder prediction 900 927 - -
Ahy10g1682 989 Pfam Receptor family ligand binding region 66 404 IPR001828 -
Ahy10g1682 989 MobiDBLite consensus disorder prediction 948 989 - -
Ahy10g1682 989 Gene3D - 360 462 - -
Ahy10g1682 989 CDD GluR_Plant 462 812 - -
Ahy10g1682 989 Pfam Bacterial extracellular solute-binding proteins, family 3 489 813 IPR001638 -
Ahy10g1682 989 Gene3D - 151 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1682 Ahy-Chr10 96424187 96430466 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1682 32 934 Ion Channels AT2G29120 50.829 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1682 K05387 - pvy:116139285 1070.46